| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812693
Identifier: 237812693
GI number: 237812693
Start: 2394335
End: 2395528
Strand: Direct
Name: 237812693
Synonym: GBP346_A2445
Alternate gene names: NA
Gene position: 2394335-2395528 (Clockwise)
Preceding gene: 237812692
Following gene: 237812694
Centisome position: 58.42
GC content: 73.2
Gene sequence:
>1194_bases ATGACCATCAAGACATTGCGGCAAGAACCCGTGCTGGCGGGCGCGGCATCGCCCGCCGATACGCCCGCTTTCACGAGCGG CACGCTGGCCGCGCTCGTCGCGTTCGCGGCGATCACGCCGCTGCTGCTGCTCGTCGCGCCGGCCGTGGCCGGCCAGCTGG GCGCGCAGCTCGGGCTGTCGGCGTCGCAGATCGGCACGTACTTCTTCGTGGAGCTGGGCGCGTTCAGCGCCGCGACGCTG CCGTCGTACCTGTGGCTCGGCCGCATCGACGCGCGGCGCATCGCGTGGGGCGCGACCGCCGTGTTCTGCGCGGGCAATCT CGCGACCGCCGTATGGATGCCGGGCTTCGCGCCGCTACTCGCGCTGCGCGCGGCAACGGCGCTCGGCGGCGGCACGTTGA TGGTGCTCTGCATGACGAGCGCCGCGGCGAGCGGCAACAGCGATCGCGTCTACGGGCTCTGGGTCGTCGGCCAGTTGATC GCGGGCGCGGCCGGTCTGTTCCTGCTGCCGCATCTGTTCGATATGGTCGGACTGCGCGCGCTATACGCCGTGCTCGCCGC GCTCGCGCTATGCGCCGCGCCGCTCGCGCGCCGCTTTCCGGCCGTGCCGCGCGTGCGGGCGCAGCACGCGCCGCGCGCGC GGGCGCAAGCGGTGCGCATGGCGGCGGCGCTTGCGATCGGCGGCGTGCTGACGTTCTACGTCGCGATCGGCGGCGTGTGG ACCTTCGCGAGCAAAGCGGCGTCCGCCGTCGGCCTCGACGCGCAGACGAGCGGCAACGTGCTCGCGATCGCGAGCCTGAT GGGCATCGCGGGCGCGGCGCTCGCGTCATATCTCGGCGGCCGTGCGGCGCGGCGCGCGATGCTGCTCGCCGGATACGGCA TCCTCGCGGCGTCGCTCGTCGCGCTTGCCGCCGCGCCAAACGCGAACGGCTACACGCTCGCGATCTTCGGTTTCAAGTTC GCATGGACGTTCGTCCTGCCGTTCATGCTCGCGAGCGTCGCGGCCGTCGACGCGACGGGGCGCCTGATCGCGACGCTCAA TCTCGTGATCGGTTCGGGGCTCGCCGCCGGGCCGCTCGCCGCCGGACTGATGCTCGACGGCGGCGGCACGCTGCGCGCGC TGTTCTCGATCGCGGCCGCGGTCTCGCTCGTCTCGCTCGCGGCCATGCTGCGCGTCGAGCGCGACGCGCGCTGA
Upstream 100 bases:
>100_bases TCTACGAGTACGACCCGACGCCGCTCGCCGGCGCATCGCAGTTCGGCGCGATGCTCGGCATGTATCACGTTTTCTGAATC GAGCCCGCGAGATCACGACC
Downstream 100 bases:
>100_bases CGCCTCGACACTCCGTGTCGTTGCTTTCCCTTCCCTCTTCGCTTCGGCCCATCGCCATGACAAAAACCGCTTTCTTCACC GACGAACGCACTTTCTGGCA
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; MFS-Type Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTIKTLRQEPVLAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASQIGTYFFVELGAFSAATL PSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLI AGAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAVRMAAALAIGGVLTFYVAIGGVW TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKF AWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR
Sequences:
>Translated_397_residues MTIKTLRQEPVLAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASQIGTYFFVELGAFSAATL PSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLI AGAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAVRMAAALAIGGVLTFYVAIGGVW TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKF AWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR >Mature_396_residues TIKTLRQEPVLAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASQIGTYFFVELGAFSAATLP SYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIA GAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAVRMAAALAIGGVLTFYVAIGGVWT FASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKFA WTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39998; Mature: 39867
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTLRQEPVLAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLS CCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASQIGTYFFVELGAFSAATLPSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLL HHHHHHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHCCCHHHHH ALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIAGAAGLFLLPHLFDMVGLRA HHHHHHHCCCCCEEEHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAVRMAAALAIGGVLTFYVAIGGVW HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ALAAAPNANGYTLAIFGFKFAWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLA HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH AGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR HCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIKTLRQEPVLAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLS CCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASQIGTYFFVELGAFSAATLPSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLL HHHHHHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHCCCHHHHH ALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIAGAAGLFLLPHLFDMVGLRA HHHHHHHCCCCCEEEHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAVRMAAALAIGGVLTFYVAIGGVW HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ALAAAPNANGYTLAIFGFKFAWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLA HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH AGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR HCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA