| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812691
Identifier: 237812691
GI number: 237812691
Start: 2391765
End: 2392910
Strand: Reverse
Name: 237812691
Synonym: GBP346_A2443
Alternate gene names: NA
Gene position: 2392910-2391765 (Counterclockwise)
Preceding gene: 237812696
Following gene: 237812690
Centisome position: 58.38
GC content: 69.11
Gene sequence:
>1146_bases GTGGCGATCAGGGCGGGGACCCGGCAGGACATCGATGCGCTGCGCGACGTGCCGGCGGCGATCGTGCTCGACGAAGCCGC ATGGCCGCCGCTTGCGCCGCGCCGGCGTGATTTCGACGGCGTCACGCAGACGCCCGGCGCGGCGTCGCGCGAACTGAGCC TGTTCCTGCTGGATCTCTACGCGGTCGCGAGCCGTGCGTCGATCGGCGAATTCGAATGCCGCTTCTTTCAGCTGTTGTCG CGCTATCTGCCGTTCGACGCCGCCTGGACGGGCGTCGCGAATCACACGCCGGGCGGCCCCGTGATGCACAACAGCTATCT ATACCGGCTGCCGCACGCGTTCTTCACCGATTGGAAGCGCGTGCGCGATTGCGATCCGCTCGCGCATCGCACCTTGCATG GCGCATACGGCCGGGCGGCGATCCTGTCCGTCGTCGAGCCGGGGCTCGACGGGCGTTTTCGCGACTGGTGCGTCAAGTAC GGGCTCGCGCAACTGATGTGCGTGTGCACGCTCGATCGGCGCTTCGGACTCGCGACGTTTTTGTCGATCTACCGGCACGC CCTGAATCGTCCGTTCACCGAAGAGGACGCGCGCCGCTACGAGGACGTGATTGCGCATCTGGCGGCCGCATTGACGATCA ATCGCGCCGCGCAACTCACGCGCCTGCGCAGCGAAGCGGCCGCGTCGACGGTGCGCGCGATCTGCGACAACTTCGGCGTG CTGCATCACGCGGATGCCGGCTTCGGCGCGGTGCTGCGCAGCGAATGGCCGGACTGGGCGGGTTCGCGGCTGCCGCCGGC GTTTGTCGAGCATCTGCGCCGCCGCGCGTCGCAGCCGTATTCGGGCGACGCGCTGTGCATGCGGTGCATGCCCGTCGCCG GCCTGTTCCAGCTCGAGGTGCGGCCCCGCTCGCTGCTCGATCGCCTGAGCCCGCGCGAGCTCGCGGCGATCCGCTATTAC GGCGAAGGGCGCTCGCACAAGGAAGTCGCGCAGCAGATGGAGATCGCGCCGGCGACCGTGCGCCACTATTTGCGCTGCGC GTATCGCAAGCTCGGGATGCACGACAAGAGCCAGATCGGCGGCGTGCTCGGCGAGCTCGATCGTGCCGCCGAGGGAGCCG GCGCGGCGCGCGACATCGACGGCTGA
Upstream 100 bases:
>100_bases CGGGCGGTTTTCAAAAAAGACCGGCGGCTATAATCGATCGCTCAACGAAGCGATCGAAGCGCGCAAGGCCGGCTGCGAGC GGGCAAGGGAGCGGTCAGTG
Downstream 100 bases:
>100_bases CGCGCGGTGCGCGCGGCCGGATGGTTGTGCATGCAACTATTTGGCTCTATGCTCGCGGCTTCATCGAACGAGGAGAAACG CATATGGATCGAGCACCGGT
Product: transcriptional regulator, LuxR family
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAIRAGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLS RYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKY GLAQLMCVCTLDRRFGLATFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRASQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYY GEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG
Sequences:
>Translated_381_residues MAIRAGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLS RYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKY GLAQLMCVCTLDRRFGLATFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRASQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYY GEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG >Mature_380_residues AIRAGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLSR YLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYG LAQLMCVCTLDRRFGLATFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVL HHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRASQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYYG EGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42474; Mature: 42343
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRAGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLY CCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVASRASIGEFECRFFQLLSRYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKR HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEECCHHHHCCHHHHHHHHH VRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYGLAQLMCVCTLDRRFGLATF HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRASQPYSGDALCMRCMPVAGLFQLEV EEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEC RPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIG CHHHHHHCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH GVLGELDRAAEGAGAARDIDG HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AIRAGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLY CCCCCCHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVASRASIGEFECRFFQLLSRYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKR HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEECCHHHHCCHHHHHHHHH VRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYGLAQLMCVCTLDRRFGLATF HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRASQPYSGDALCMRCMPVAGLFQLEV EEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEC RPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIG CHHHHHHCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH GVLGELDRAAEGAGAARDIDG HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA