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The map label for this gene is yncB [H]

Identifier: 237812646

GI number: 237812646

Start: 2350752

End: 2351750

Strand: Reverse

Name: yncB [H]

Synonym: GBP346_A2396

Alternate gene names: 237812646

Gene position: 2351750-2350752 (Counterclockwise)

Preceding gene: 237812647

Following gene: 237812645

Centisome position: 57.38

GC content: 71.17

Gene sequence:

>999_bases
ATGTCACAGGTCAACCGGCGGGTGTTGCTCGTGTCGCGCCCCGAACGCGAGGCGCGCGTCGAGAACTTCGAACTCGTCGA
GACGCCGCTTGCGTCGCTCGCCGAAGGCGAGGTGCGCGTGCGCAATCATTTTCTGTCGATCGATCCGTACATGCGCAGGC
GGATGAACGCGGGGCGCTCGTACGCCGAGCCGCAACCGCTCGGCGAGGTGATGGGCGGCGGCACCGCCGGCGAGGTCGTC
GAGTCGCGCAATCCGGCGTTCGCCCCCGGCGATCGCGTGATCGGCGCGTACGGCTGGCAGGAGTACGGCACGTCGACGGG
CAAGGAACTGCGCAAGGTCGACACGACGCGCGTGCCGCTGTCCGCGTATCTCGGAGCCGTCGGAATGCCCGGCGTGACCG
CGTGGTACGGCCTGAACCGGATCATCCGGCCGCGCGCGGGCGAGACGCTCGTCGTCAGCGCGGCGAGCGGCGCGGTCGGC
AGCGTGGTCGGGCAGCTCGCGAAGCTCGCCGGGTGTCGCGCGGTCGGCATCGCGGGCGGCGCGGACAAGTGCCGCTACGT
CGTCGATACGCTCGGCTTCGATGCGTGCATCGACTACAAGGCGGGCCGGCTCGCCGACGATCTCGCGGCCGCCGCGCCGG
ACGGCGTCGACGGCTGTTTCGAGAACGTCGGCGGCGCGGTGCTCGATGCGACGCTCGCGCGGATGAACCCGTTCGGGCGC
ATCGCGATGTGCGGGATGATCGCCGCGTACGACGGCGCGCCCGCGCCGCTCGCGAACCCGGCGCTGGTCCTGCGCGAGCG
GCTGCTCGTGCAGGGCTTCATCGTGTCCGAGCACTTCGACGTGTGGCCCGAGGCGCTCGCGCAGCTCGCGTCGCTCGTCG
CGAACAGGCAGCTGCATTATCGGGAGACGATCGCGCAGGGCCTCGAGCGCGCGCCCGACGCGCTGCTCGGGCTGCTGAAA
GGGCGCAATTTCGGCAAGCAGCTCGTCGCGCTCGTCTGA

Upstream 100 bases:

>100_bases
GACGCATGACGCGAGCGGGCGGCCCCGCCCGTCGGCGGAGCCGTTTGCCGTCGGCGCGGCCGCGCGCGCGACGACGGCCC
GATGCACGAGGAGGCAGGCA

Downstream 100 bases:

>100_bases
CGCGCCGTGGCATCATACGGCGCTTGTCCCGAGCCTTTCACCGGCGCGCCCGCGCCGTTCGCCCGCCGTTTGCGTTGCTG
TTTGCCCCGCCGTTTGCCCT

Product: putative NADP-dependent oxidoreductase yncb

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSQVNRRVLLVSRPEREARVENFELVETPLASLAEGEVRVRNHFLSIDPYMRRRMNAGRSYAEPQPLGEVMGGGTAGEVV
ESRNPAFAPGDRVIGAYGWQEYGTSTGKELRKVDTTRVPLSAYLGAVGMPGVTAWYGLNRIIRPRAGETLVVSAASGAVG
SVVGQLAKLAGCRAVGIAGGADKCRYVVDTLGFDACIDYKAGRLADDLAAAAPDGVDGCFENVGGAVLDATLARMNPFGR
IAMCGMIAAYDGAPAPLANPALVLRERLLVQGFIVSEHFDVWPEALAQLASLVANRQLHYRETIAQGLERAPDALLGLLK
GRNFGKQLVALV

Sequences:

>Translated_332_residues
MSQVNRRVLLVSRPEREARVENFELVETPLASLAEGEVRVRNHFLSIDPYMRRRMNAGRSYAEPQPLGEVMGGGTAGEVV
ESRNPAFAPGDRVIGAYGWQEYGTSTGKELRKVDTTRVPLSAYLGAVGMPGVTAWYGLNRIIRPRAGETLVVSAASGAVG
SVVGQLAKLAGCRAVGIAGGADKCRYVVDTLGFDACIDYKAGRLADDLAAAAPDGVDGCFENVGGAVLDATLARMNPFGR
IAMCGMIAAYDGAPAPLANPALVLRERLLVQGFIVSEHFDVWPEALAQLASLVANRQLHYRETIAQGLERAPDALLGLLK
GRNFGKQLVALV
>Mature_331_residues
SQVNRRVLLVSRPEREARVENFELVETPLASLAEGEVRVRNHFLSIDPYMRRRMNAGRSYAEPQPLGEVMGGGTAGEVVE
SRNPAFAPGDRVIGAYGWQEYGTSTGKELRKVDTTRVPLSAYLGAVGMPGVTAWYGLNRIIRPRAGETLVVSAASGAVGS
VVGQLAKLAGCRAVGIAGGADKCRYVVDTLGFDACIDYKAGRLADDLAAAAPDGVDGCFENVGGAVLDATLARMNPFGRI
AMCGMIAAYDGAPAPLANPALVLRERLLVQGFIVSEHFDVWPEALAQLASLVANRQLHYRETIAQGLERAPDALLGLLKG
RNFGKQLVALV

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=315, Percent_Identity=41.5873015873016, Blast_Score=215, Evalue=4e-56,
Organism=Homo sapiens, GI226059133, Length=315, Percent_Identity=41.5873015873016, Blast_Score=215, Evalue=4e-56,
Organism=Homo sapiens, GI226246682, Length=343, Percent_Identity=39.067055393586, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI226246680, Length=343, Percent_Identity=39.067055393586, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI22748929, Length=343, Percent_Identity=39.067055393586, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI226056130, Length=260, Percent_Identity=42.6923076923077, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI28557745, Length=215, Percent_Identity=28.3720930232558, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI226510941, Length=335, Percent_Identity=46.2686567164179, Blast_Score=294, Evalue=7e-81,
Organism=Caenorhabditis elegans, GI133901712, Length=351, Percent_Identity=34.1880341880342, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI133901710, Length=351, Percent_Identity=34.1880341880342, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17507255, Length=235, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323504, Length=328, Percent_Identity=31.0975609756098, Blast_Score=129, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35350; Mature: 35219

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVNRRVLLVSRPEREARVENFELVETPLASLAEGEVRVRNHFLSIDPYMRRRMNAGRS
CCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHEECCCHHHHHHHHCCCC
YAEPQPLGEVMGGGTAGEVVESRNPAFAPGDRVIGAYGWQEYGTSTGKELRKVDTTRVPL
CCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHCCCHHHHHHHHCCCCCCH
SAYLGAVGMPGVTAWYGLNRIIRPRAGETLVVSAASGAVGSVVGQLAKLAGCRAVGIAGG
HHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCC
ADKCRYVVDTLGFDACIDYKAGRLADDLAAAAPDGVDGCFENVGGAVLDATLARMNPFGR
CHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCH
IAMCGMIAAYDGAPAPLANPALVLRERLLVQGFIVSEHFDVWPEALAQLASLVANRQLHY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RETIAQGLERAPDALLGLLKGRNFGKQLVALV
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
SQVNRRVLLVSRPEREARVENFELVETPLASLAEGEVRVRNHFLSIDPYMRRRMNAGRS
CCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHEECCCHHHHHHHHCCCC
YAEPQPLGEVMGGGTAGEVVESRNPAFAPGDRVIGAYGWQEYGTSTGKELRKVDTTRVPL
CCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHCCCHHHHHHHHCCCCCCH
SAYLGAVGMPGVTAWYGLNRIIRPRAGETLVVSAASGAVGSVVGQLAKLAGCRAVGIAGG
HHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCC
ADKCRYVVDTLGFDACIDYKAGRLADDLAAAAPDGVDGCFENVGGAVLDATLARMNPFGR
CHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCH
IAMCGMIAAYDGAPAPLANPALVLRERLLVQGFIVSEHFDVWPEALAQLASLVANRQLHY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RETIAQGLERAPDALLGLLKGRNFGKQLVALV
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]