| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is zntR [C]
Identifier: 237812570
GI number: 237812570
Start: 2285816
End: 2286283
Strand: Direct
Name: zntR [C]
Synonym: GBP346_A2320
Alternate gene names: 237812570
Gene position: 2285816-2286283 (Clockwise)
Preceding gene: 237812569
Following gene: 237812571
Centisome position: 55.77
GC content: 70.94
Gene sequence:
>468_bases GTGCGCGACGCCGCCGAGCGGCTCGGCGTGACGCCGCGCACGCTCAAGTACTACGAGGAGCGCGGGCTCGTCACGCCGTC GCGCAGCGAGGGCCGCTATCGGCTGTATGACGCCGCGGACCTCGAACGCTTCGAGCGCATCCTGCGGCTGCGCGCGCTCG GGTTCTCGCTGCACGGCATCACGGAAATGCTCAAGCGCCCGCTCGAGCCGGCAGGCGACGGGCGGCGGCGCTATTCGGAC GCATCGTTGCGTGACATTCACGCGGATCTGTCGCAGCAGATCGCGACGCTCGACGCGCGCATCGCCGCCGCGCAGCGCGA ACTGAAGGAAGTGCGCGCGCTGAAGCAGGAGTTGCAGCACGACATCGACTATGTCGAGCGCCGGCTCGCCGGCGAAAACC CCGACGAGCTGATCGCGCAGCGCCGCGCCGCCGCGCGCGCGCGCAAGACGGGCGGGACAAGCGCATGA
Upstream 100 bases:
>100_bases ACGTGAACGTACACGTTGATCTATAATCGCGAACATCGATCCTTCGTCATCCGGAGAATGCCGCGCCATGAGCGATGCTC CGCCCACCCTGCTTCTGACC
Downstream 100 bases:
>100_bases GTGCCGCGCCGGGCCGACCGCCGCTCTGGAGCGCCGCGAACCTGCGCGGCGATTTCTTTCCATGGGTGCTCGCGATCGTC ACCGGCCTCGATTACTTCGA
Product: transcriptional regulator, MerR family
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLEPAGDGRRRYSD ASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENPDELIAQRRAAARARKTGGTSA
Sequences:
>Translated_155_residues MRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLEPAGDGRRRYSD ASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENPDELIAQRRAAARARKTGGTSA >Mature_155_residues MRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGITEMLKRPLEPAGDGRRRYSD ASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQHDIDYVERRLAGENPDELIAQRRAAARARKTGGTSA
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17672; Mature: 17672
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGI CCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH TEMLKRPLEPAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQH HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIDYVERRLAGENPDELIAQRRAAARARKTGGTSA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRDAAERLGVTPRTLKYYEERGLVTPSRSEGRYRLYDAADLERFERILRLRALGFSLHGI CCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH TEMLKRPLEPAGDGRRRYSDASLRDIHADLSQQIATLDARIAAAQRELKEVRALKQELQH HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIDYVERRLAGENPDELIAQRRAAARARKTGGTSA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA