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The map label for this gene is ybbM [C]

Identifier: 237812512

GI number: 237812512

Start: 2226892

End: 2227710

Strand: Direct

Name: ybbM [C]

Synonym: GBP346_A2261

Alternate gene names: 237812512

Gene position: 2226892-2227710 (Clockwise)

Preceding gene: 237812511

Following gene: 237812513

Centisome position: 54.33

GC content: 69.6

Gene sequence:

>819_bases
ATGAACACGCCGCTGCAAGACCTGAGTCTCGTCGACGTCGGGATCGCGGCGGCGCTCGTCGCGATCAACGGCGCGATTTC
GGTCGCGCTATCGCTCGGCCTCGGCCGCAAGCTCGCATGGGCGGCCGCGCGCACCGTCGTGCAGTTGCTCGCGATCGGCT
ACGTGCTCGGCTGGGTGTTCGGCCATCCGCGCTGGTACGTCGTGCTGCCGCTCGTCGCGCTGATGACGCTGATCGCGGGC
TTCGCGGGTGCCGCGCGCGGCAAGCGAACCTATGCGGGGCAACGCGCGGACAGCGTCCTGTCGATCTGGGCGAGCAGTTG
GTTCGTCGCGGCGATCGGGCTGTTCGTCGTGATCCGCATCCATCCGTGGTACGCGCCGCAATATGCGATCCCGATCCTCG
GGATGATTCTCGGCAATACGCTCACCGGCGTGTCGCTCGGCGTCGAGCGGATGATGGAGGAGCTGACCGCGCGGCGCGAC
CGCGTCGAGACGGCGCTCGCGCTCGGCGCGACGCGCTGGGAAGCCGCGCAGGACGCGGCGCGCCAGGCGGTGCGCGCCGG
CATGCTGCCGACGCTCAACCAGATGGCCGTCGTCGGCGTCGTGAGCCTGCCCGGGATGATGACGGGCCAGGTACTGGCCG
GACAGTCGCCGCTGCAAGCCGTCCGATACCAGATCGTGATCATGTTCCTGATCGCGGCGGCGTCCGCGCTCGGCACCGTC
GGGGCGGTGCTGTCCACTTACCGGCGGCTCTTCTCCGCCGAGCATCGGTTTCTGGCGTCGCGGCTCGTCGAGCGGGAAAG
AACCGCGAACGGCGGGTAA

Upstream 100 bases:

>100_bases
TGTGGATTTCGCACGATCCGGCGCAGGCGGCACGCGTCGGCCGCCGGCGCCTGACGATGCGCGCCGGCGTGCTCGGCGAC
GCCGCGACGCAGGACGCGCG

Downstream 100 bases:

>100_bases
AAAGAAATTCCTGCTTGCGTGCCCGGCGAACGGATTCGTCGGCCGCGCGCCGGATGGCTCGTGGATTCGCACGGCCGTAA
CGGTCGGTTCGGCCAGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNTPLQDLSLVDVGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLAIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSVLSIWASSWFVAAIGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERERTANGG

Sequences:

>Translated_272_residues
MNTPLQDLSLVDVGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLAIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSVLSIWASSWFVAAIGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERERTANGG
>Mature_272_residues
MNTPLQDLSLVDVGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLAIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSVLSIWASSWFVAAIGLFVVIRIHPWYAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERERTANGG

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=270, Percent_Identity=28.1481481481481, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28995; Mature: 28995

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]