| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812506
Identifier: 237812506
GI number: 237812506
Start: 2217600
End: 2218790
Strand: Reverse
Name: 237812506
Synonym: GBP346_A2255
Alternate gene names: NA
Gene position: 2218790-2217600 (Counterclockwise)
Preceding gene: 237812507
Following gene: 237812505
Centisome position: 54.14
GC content: 68.6
Gene sequence:
>1191_bases ATGACCGGTTCCATTCCCTTTCCGCCGCTGATGATCCGCGGCCGTTCGCTGTTGCCCATCGTGCAGGGCGGGATGGGCGT CGGCATCTCCGCGCATCGGCTCGCTGGAAGCGTCGCGCGCGAAGGCGCGCTCGGCACGATCGCGAGCATCGACTTGCGCC ATCACCATACCGATCTGATCGAGCGCTGCAAGCGGCATCCGGATCGCGAGACGATGGAGGCGGCGAACCTCGAGGCGCTC GCGCGCGAGATCCAGCGCGCGAAGACGTGGGGCGAGGGGCGCGGCATGATCGCGGTCAACGTGATGAAGGCGGTGCGCTC GCACGCCGACTATGTGCGCATCGCATGCGAGTTTGGCGCGGACGCGATCGTGATGGGCGCGGGCTTGCCGCTCGATCTGC CGGACATGACGCAGGGGCACGACATCGCGCTGATCCCGATCCTGTCGGACAGCCGCGGCATCGCGCTCGTGCTGAAGAAG TGGATGAAGAAAGGGCGTCTGCCCGATGCGATCGTGATCGAGCATCCGGCCCGCGCGGGCGGCCATCTCGGCGTGACGAG CCTCGACGACATGGACGATCCGCGCTTCGAATTCGCGCGGGTCATCGACGAAACCCGGCAGACGTTCGCCACGCTCGGCC TCGAGCGCGAGCGCATCGCGCTCGTCGTCGCGGGCGGCATCAACAGCCACGAGGCGGTGCGCGCGGCGCTCGCCGAAGGC GCGAACGGCGTGCAGGTGGGCACGCCGTTCGCGGTCACCGAGGAGGGCGATGCGCATCCGAACTTCAAGCGCGTGCTCGC GAACGCGAAGCCGGACGACATCGTCGAGTTCTTGAGCGTCACGGGGCTGCCGGCGCGCGCGGTGAAGACGCCGTGGCTCG AGCGTTATCTGCGGCACGAGACGCGCATTCGCGCGAAGATCGGCGCGCTCAAGCAGCGCTGCCCGTCGGCGCTCGAATGC CTGAGTGTGTGCGGCTTGCGCGACGGCATCGAGCGCTTCGGCCACTTCTGCATCGATACGCGCCTGGCCGCCGCGCTGCG CGGCGACGTCGCGAACGGGCTGTTCTTCCGCGGCCGCGAAGCGCTGCCGTTCGGGCAGGCGATTCGCAGCGTGCGCGATC TGCTCGAGCTGCTGCTCACGGGCACCGCACCCGAAGCTGCGGCAAACCGTCCCACTTTCTCGTTGTCGTAA
Upstream 100 bases:
>100_bases GCGTACATGCGCATGCGTGCCGTTTTTCTTGATGATGGTCAAAGCGCTTCGCCGCTAATCGCCGATCATCGAACTCTTTC TGCCGTACTGAGAGATTGCG
Downstream 100 bases:
>100_bases TACTTGATGTCGGTCAATATAAGTAGGGAACCATCCCCCGAGAATGAAGCCTGTTCTTAGGGGGTCCTTAACATGCGTCG TCAAACAATTCGTACTTGCA
Product: oxidoreductase, 2-nitropropane dioxygenase family
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase; 2-Nitropropane Dioxygenase Npd; Enoyl-[Acyl-Carrier-Protein] Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTGSIPFPPLMIRGRSLLPIVQGGMGVGISAHRLAGSVAREGALGTIASIDLRHHHTDLIERCKRHPDRETMEAANLEAL AREIQRAKTWGEGRGMIAVNVMKAVRSHADYVRIACEFGADAIVMGAGLPLDLPDMTQGHDIALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPARAGGHLGVTSLDDMDDPRFEFARVIDETRQTFATLGLERERIALVVAGGINSHEAVRAALAEG ANGVQVGTPFAVTEEGDAHPNFKRVLANAKPDDIVEFLSVTGLPARAVKTPWLERYLRHETRIRAKIGALKQRCPSALEC LSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGQAIRSVRDLLELLLTGTAPEAAANRPTFSLS
Sequences:
>Translated_396_residues MTGSIPFPPLMIRGRSLLPIVQGGMGVGISAHRLAGSVAREGALGTIASIDLRHHHTDLIERCKRHPDRETMEAANLEAL AREIQRAKTWGEGRGMIAVNVMKAVRSHADYVRIACEFGADAIVMGAGLPLDLPDMTQGHDIALIPILSDSRGIALVLKK WMKKGRLPDAIVIEHPARAGGHLGVTSLDDMDDPRFEFARVIDETRQTFATLGLERERIALVVAGGINSHEAVRAALAEG ANGVQVGTPFAVTEEGDAHPNFKRVLANAKPDDIVEFLSVTGLPARAVKTPWLERYLRHETRIRAKIGALKQRCPSALEC LSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGQAIRSVRDLLELLLTGTAPEAAANRPTFSLS >Mature_395_residues TGSIPFPPLMIRGRSLLPIVQGGMGVGISAHRLAGSVAREGALGTIASIDLRHHHTDLIERCKRHPDRETMEAANLEALA REIQRAKTWGEGRGMIAVNVMKAVRSHADYVRIACEFGADAIVMGAGLPLDLPDMTQGHDIALIPILSDSRGIALVLKKW MKKGRLPDAIVIEHPARAGGHLGVTSLDDMDDPRFEFARVIDETRQTFATLGLERERIALVVAGGINSHEAVRAALAEGA NGVQVGTPFAVTEEGDAHPNFKRVLANAKPDDIVEFLSVTGLPARAVKTPWLERYLRHETRIRAKIGALKQRCPSALECL SVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGQAIRSVRDLLELLLTGTAPEAAANRPTFSLS
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42872; Mature: 42741
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSIPFPPLMIRGRSLLPIVQGGMGVGISAHRLAGSVAREGALGTIASIDLRHHHTDLI CCCCCCCCHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHH ERCKRHPDRETMEAANLEALAREIQRAKTWGEGRGMIAVNVMKAVRSHADYVRIACEFGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEECCCC DAIVMGAGLPLDLPDMTQGHDIALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPARAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTSLDDMDDPRFEFARVIDETRQTFATLGLERERIALVVAGGINSHEAVRAALAEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPNFKRVLANAKPDDIVEFLSVTGLPARAVKTPWLERYLRHE CCCCEECCCEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRAKIGALKQRCPSALECLSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGQAIRSVRDLLELLLTGTAPEAAANRPTFSLS CCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure TGSIPFPPLMIRGRSLLPIVQGGMGVGISAHRLAGSVAREGALGTIASIDLRHHHTDLI CCCCCCCHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHH ERCKRHPDRETMEAANLEALAREIQRAKTWGEGRGMIAVNVMKAVRSHADYVRIACEFGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEECCCC DAIVMGAGLPLDLPDMTQGHDIALIPILSDSRGIALVLKKWMKKGRLPDAIVIEHPARAG CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC GHLGVTSLDDMDDPRFEFARVIDETRQTFATLGLERERIALVVAGGINSHEAVRAALAEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC ANGVQVGTPFAVTEEGDAHPNFKRVLANAKPDDIVEFLSVTGLPARAVKTPWLERYLRHE CCCCEECCCEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH TRIRAKIGALKQRCPSALECLSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGRE HHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC ALPFGQAIRSVRDLLELLLTGTAPEAAANRPTFSLS CCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA