Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812480

Identifier: 237812480

GI number: 237812480

Start: 2189380

End: 2189754

Strand: Direct

Name: 237812480

Synonym: GBP346_A2229

Alternate gene names: NA

Gene position: 2189380-2189754 (Clockwise)

Preceding gene: 237812471

Following gene: 237812482

Centisome position: 53.42

GC content: 72.27

Gene sequence:

>375_bases
ATGCTCGATCGCCCGGAAACCGTCTCGTACCTGCTCGCGAGCGCGCTGTTCTTCGCGCTCGCCGTCCCGCTCGCGGCCCA
ACGGATCGCGCCCAATCGCTTCTACGGCGTTAGGACCCGCGCGACGCTCCGGAACCCCGCGCTCTGGTACCGGCGCAACC
GGGTCTTCGGCGTCGCGCTGATGATCACGAGCGCGACCTTCATCGTCGTGGCCGAATACTGCCGGCTGCGCGGCGTGCGG
CTACCCGATGCGGCGCTGCTCGCGGCGTTCGTCGCCGAAATCGCGGTGCCGATCGCCGTGTGCTTCGCGGCGGGCCGTCC
GCCCGAAACGCCCGAAACGCCGAGCCGCCGCGCGGGCGACGGCCGCCGGCGCTAG

Upstream 100 bases:

>100_bases
CCGCGAGCCGTGCGTACAAGCCGGCGGCATGCCGCGTCGCGCCGGCTCGCGCGCCGTCACGGCGTTTCATATGCCCGTTC
GTTTCATCGGAGCAGACCGC

Downstream 100 bases:

>100_bases
TCGTTCGCGGGCGATCGAACCCGCGCCCCGCCTGCCCGCTCGCGCCACGGCGCGCCGCCCGTCAGGCGGCTCGGGCCTGG
GCGATGCACAGTTCGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLDRPETVSYLLASALFFALAVPLAAQRIAPNRFYGVRTRATLRNPALWYRRNRVFGVALMITSATFIVVAEYCRLRGVR
LPDAALLAAFVAEIAVPIAVCFAAGRPPETPETPSRRAGDGRRR

Sequences:

>Translated_124_residues
MLDRPETVSYLLASALFFALAVPLAAQRIAPNRFYGVRTRATLRNPALWYRRNRVFGVALMITSATFIVVAEYCRLRGVR
LPDAALLAAFVAEIAVPIAVCFAAGRPPETPETPSRRAGDGRRR
>Mature_124_residues
MLDRPETVSYLLASALFFALAVPLAAQRIAPNRFYGVRTRATLRNPALWYRRNRVFGVALMITSATFIVVAEYCRLRGVR
LPDAALLAAFVAEIAVPIAVCFAAGRPPETPETPSRRAGDGRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13689; Mature: 13689

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRPETVSYLLASALFFALAVPLAAQRIAPNRFYGVRTRATLRNPALWYRRNRVFGVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHCCHHHHHH
MITSATFIVVAEYCRLRGVRLPDAALLAAFVAEIAVPIAVCFAAGRPPETPETPSRRAGD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRRR
CCCC
>Mature Secondary Structure
MLDRPETVSYLLASALFFALAVPLAAQRIAPNRFYGVRTRATLRNPALWYRRNRVFGVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHCCHHHHHH
MITSATFIVVAEYCRLRGVRLPDAALLAAFVAEIAVPIAVCFAAGRPPETPETPSRRAGD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA