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The map label for this gene is 237812478

Identifier: 237812478

GI number: 237812478

Start: 2188320

End: 2189084

Strand: Reverse

Name: 237812478

Synonym: GBP346_A2227

Alternate gene names: NA

Gene position: 2189084-2188320 (Counterclockwise)

Preceding gene: 237812479

Following gene: 237812477

Centisome position: 53.41

GC content: 77.65

Gene sequence:

>765_bases
ATGGTCGATATCGTGATCGTCGCGAGCGCGTTCGGCGCGGATGCGGTCCGCCGCGCGGGCCATCGCGCGTTCGTCGCGGC
GGTGGCCGATGCGGGCGCCGCCGGCTTCGAGGTGCGCCGCGAACTGTTCGCGGCGGACGACGACGCGGCCGCGCCGGCGC
TGGCGGCGCTCGGCCGCGCGATCGCCGCGGCCGGGTTGTGGTCGGTGTACTCGACGCCCGCGGCGCTCTATGCGGACGAC
GGCGACCTGAACCGCGACGCGCTCGCGGCTGCGCTCGACCAGGCCGACGCGCTCGGCGCGCGCTTCGTGAAGTTCCAGTT
GGGCGGCTTCGCGGCGAACCCGCATGCAGCCGAGCTCGCCGGCGCGACGCGCGGCGCGCGCGCCCGCGTGCTGGTCGAGA
ACGGCCAGTCGCGGCAGGGCGGCGCGCTCGCGCAGTTCACGACGCTGTTCGCCGCGCTGCGCGACGCGCGCGGCCCGGCG
CCCGTCGGCATGACGTTCGACATCGGCAACTGGCTGTGGGCGGGCGAGGCGCCGCTCGCGGCCGCGCGCGCGCTCGCCGC
GCACGTCGAATACGTCCATTGCAAGGCGGCCGACGGCGAAGGCGCGCGCCGCTTCGCGATCGCGCCGCCGCCCGGCGACC
GCCTCTGCGGCGATGCGCTCGCGCTGCTGCCGCGCACCGCGCCGCGCGGGATCGAATTTCCGCTCGACGCGGCGCGCGTG
GCCGACGACGCGGCGGCGCGCGTCGCGTGGCTCGCGGCCGCATGA

Upstream 100 bases:

>100_bases
TTGGCATCCGGTGCTCGGCGCAACATTCCTCCAATTCGTGAATGGAACCGGTTCCATCCACGAATTCCAGCACATCCCGC
CGAGAAGGAGGCAAGCAGGC

Downstream 100 bases:

>100_bases
AACCCACCCACCGTCGCCCGGCTCGGCTAAGCTCGTTGTTTGCGCCGACGCCGGGCCGTTGATCGAAGGAGTCCGCCCAC
ATCATGCAAGTCCCGCTCGA

Product: AP endonuclease, family 2

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Sugar Phosphate Isomerases/Epimerase; Epimerase KguE-Like

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MVDIVIVASAFGADAVRRAGHRAFVAAVADAGAAGFEVRRELFAADDDAAAPALAALGRAIAAAGLWSVYSTPAALYADD
GDLNRDALAAALDQADALGARFVKFQLGGFAANPHAAELAGATRGARARVLVENGQSRQGGALAQFTTLFAALRDARGPA
PVGMTFDIGNWLWAGEAPLAAARALAAHVEYVHCKAADGEGARRFAIAPPPGDRLCGDALALLPRTAPRGIEFPLDAARV
ADDAAARVAWLAAA

Sequences:

>Translated_254_residues
MVDIVIVASAFGADAVRRAGHRAFVAAVADAGAAGFEVRRELFAADDDAAAPALAALGRAIAAAGLWSVYSTPAALYADD
GDLNRDALAAALDQADALGARFVKFQLGGFAANPHAAELAGATRGARARVLVENGQSRQGGALAQFTTLFAALRDARGPA
PVGMTFDIGNWLWAGEAPLAAARALAAHVEYVHCKAADGEGARRFAIAPPPGDRLCGDALALLPRTAPRGIEFPLDAARV
ADDAAARVAWLAAA
>Mature_254_residues
MVDIVIVASAFGADAVRRAGHRAFVAAVADAGAAGFEVRRELFAADDDAAAPALAALGRAIAAAGLWSVYSTPAALYADD
GDLNRDALAAALDQADALGARFVKFQLGGFAANPHAAELAGATRGARARVLVENGQSRQGGALAQFTTLFAALRDARGPA
PVGMTFDIGNWLWAGEAPLAAARALAAHVEYVHCKAADGEGARRFAIAPPPGDRLCGDALALLPRTAPRGIEFPLDAARV
ADDAAARVAWLAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25890; Mature: 25890

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIVIVASAFGADAVRRAGHRAFVAAVADAGAAGFEVRRELFAADDDAAAPALAALGRA
CEEEEEEECHHCHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
IAAAGLWSVYSTPAALYADDGDLNRDALAAALDQADALGARFVKFQLGGFAANPHAAELA
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCEECCCCHHHHH
GATRGARARVLVENGQSRQGGALAQFTTLFAALRDARGPAPVGMTFDIGNWLWAGEAPLA
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCHHH
AARALAAHVEYVHCKAADGEGARRFAIAPPPGDRLCGDALALLPRTAPRGIEFPLDAARV
HHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
ADDAAARVAWLAAA
HHHHHHHHHHEECC
>Mature Secondary Structure
MVDIVIVASAFGADAVRRAGHRAFVAAVADAGAAGFEVRRELFAADDDAAAPALAALGRA
CEEEEEEECHHCHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
IAAAGLWSVYSTPAALYADDGDLNRDALAAALDQADALGARFVKFQLGGFAANPHAAELA
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEECCEECCCCHHHHH
GATRGARARVLVENGQSRQGGALAQFTTLFAALRDARGPAPVGMTFDIGNWLWAGEAPLA
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCHHH
AARALAAHVEYVHCKAADGEGARRFAIAPPPGDRLCGDALALLPRTAPRGIEFPLDAARV
HHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
ADDAAARVAWLAAA
HHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA