| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812464
Identifier: 237812464
GI number: 237812464
Start: 2175544
End: 2176626
Strand: Reverse
Name: 237812464
Synonym: GBP346_A2213
Alternate gene names: NA
Gene position: 2176626-2175544 (Counterclockwise)
Preceding gene: 237812465
Following gene: 237812463
Centisome position: 53.11
GC content: 69.62
Gene sequence:
>1083_bases ATGACGACGAGCCCAACCTATTCGCGGCCCGAGCGGCTGCTGCAGATCGCATCGTGGGGCATTGCCGTGACGTTCGCGCT GTTTCTCGACATGCTCGGCAGCCTCGTGATTCGCGACATGGCGTTCGCGCCGCGCGGCGGGCCGCCGACGCTCGCGCGCT ACGCCGATACGCAGGCCGACGCGGCGCTGCGCGCGACGCAGCGGGAGCTGCAGCGCGAGCAGGGCGCGCTGACCGACAAG GCCGACGCGTTCTCGATCGCGCGCAATCGCGCGCAGCAGGAATACGACCAGGCGAAGGAGAGCTTGCGCAACTGGATCGC GACGCGCAGCGCGACGGGCGACGCGAGCCGCAATCCGGACGTGCTCGCGCGCACGCGCCGGCTCGACGAGCTGCAGCAGG CGGTGGCCGGCTGGCAGCGCCAGCAGGATCAGATCGCCGACCAGCTCGACGCGCTGCGCAAGCGCCAGGACGACGTGGGC GCGCGGCTCGCGCAATCGCGGGCGCAGGCCGAGTGGCGCTACGAGCAGGCGAGCCGCCGCTACGAGCTCGTCGTGTTCGC GTGGCGGCTCGCGTTCACGCTGCCGATCCTCGTGTTCGCCGTCTGGCTGTTCGTCCGTTACCGGAAGGTGCGCTACTGGC CGTTCGTCTATGGTTTCGGGATGTTCGCGCTGACGGCGTTCTTCGTCGAGCTCGTGCCGTATCTGCCGAGCTTCGGCGGC TACGTGCGCGTGATCGTGGGTATCGTGCTCACGGTGTTCGCGGGCGTGTACATGCTGCGCGCGTTCCAGCGCTACGTCGA GCGCAAGCGCGAGGAGATGCGGCGCAGCCGGCGCGAGCGCGCGCAGGCGATCGGCTACGAGAAGGCGATCGCCGCGTATC AGAAGAAGCTTTGCCCGTCATGCGACAAGCCGTGGAACCTGGGCGGCGACGGCGCGACGTTCTGTATCCACTGCGGGCTC AAGCTGTTCGATCAGTGCGGCGGATGCGGCACGCGCAATTTCGCGTTCTTTCCGTTCTGCAGCGGCTGCGGGATGCCCGT GAGCCGGGCGGAGGGCGAGCGGCGGCACGCCGGCGGCGCATGA
Upstream 100 bases:
>100_bases GTCGATCATCCTCGCGCGCAAGATCGATCGCGGGACGCTCGGCTGACGCGCGCCGCGCGCGACGACGGAGCGGATTTCGC TCACGACGGAGACCGGAAAC
Downstream 100 bases:
>100_bases CGCGCGGCCGGCTGCGCGCAGTAGCCGGCTCACTGCGATTCGATCACTTTGCAGCGCTTGCTGCAGTCCGTGTAGGCCAT GCACGCCTTGTTCGCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTTSPTYSRPERLLQIASWGIAVTFALFLDMLGSLVIRDMAFAPRGGPPTLARYADTQADAALRATQRELQREQGALTDK ADAFSIARNRAQQEYDQAKESLRNWIATRSATGDASRNPDVLARTRRLDELQQAVAGWQRQQDQIADQLDALRKRQDDVG ARLAQSRAQAEWRYEQASRRYELVVFAWRLAFTLPILVFAVWLFVRYRKVRYWPFVYGFGMFALTAFFVELVPYLPSFGG YVRVIVGIVLTVFAGVYMLRAFQRYVERKREEMRRSRRERAQAIGYEKAIAAYQKKLCPSCDKPWNLGGDGATFCIHCGL KLFDQCGGCGTRNFAFFPFCSGCGMPVSRAEGERRHAGGA
Sequences:
>Translated_360_residues MTTSPTYSRPERLLQIASWGIAVTFALFLDMLGSLVIRDMAFAPRGGPPTLARYADTQADAALRATQRELQREQGALTDK ADAFSIARNRAQQEYDQAKESLRNWIATRSATGDASRNPDVLARTRRLDELQQAVAGWQRQQDQIADQLDALRKRQDDVG ARLAQSRAQAEWRYEQASRRYELVVFAWRLAFTLPILVFAVWLFVRYRKVRYWPFVYGFGMFALTAFFVELVPYLPSFGG YVRVIVGIVLTVFAGVYMLRAFQRYVERKREEMRRSRRERAQAIGYEKAIAAYQKKLCPSCDKPWNLGGDGATFCIHCGL KLFDQCGGCGTRNFAFFPFCSGCGMPVSRAEGERRHAGGA >Mature_359_residues TTSPTYSRPERLLQIASWGIAVTFALFLDMLGSLVIRDMAFAPRGGPPTLARYADTQADAALRATQRELQREQGALTDKA DAFSIARNRAQQEYDQAKESLRNWIATRSATGDASRNPDVLARTRRLDELQQAVAGWQRQQDQIADQLDALRKRQDDVGA RLAQSRAQAEWRYEQASRRYELVVFAWRLAFTLPILVFAVWLFVRYRKVRYWPFVYGFGMFALTAFFVELVPYLPSFGGY VRVIVGIVLTVFAGVYMLRAFQRYVERKREEMRRSRRERAQAIGYEKAIAAYQKKLCPSCDKPWNLGGDGATFCIHCGLK LFDQCGGCGTRNFAFFPFCSGCGMPVSRAEGERRHAGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40885; Mature: 40754
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPTYSRPERLLQIASWGIAVTFALFLDMLGSLVIRDMAFAPRGGPPTLARYADTQAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AALRATQRELQREQGALTDKADAFSIARNRAQQEYDQAKESLRNWIATRSATGDASRNPD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VLARTRRLDELQQAVAGWQRQQDQIADQLDALRKRQDDVGARLAQSRAQAEWRYEQASRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YELVVFAWRLAFTLPILVFAVWLFVRYRKVRYWPFVYGFGMFALTAFFVELVPYLPSFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YVRVIVGIVLTVFAGVYMLRAFQRYVERKREEMRRSRRERAQAIGYEKAIAAYQKKLCPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CDKPWNLGGDGATFCIHCGLKLFDQCGGCGTRNFAFFPFCSGCGMPVSRAEGERRHAGGA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure TTSPTYSRPERLLQIASWGIAVTFALFLDMLGSLVIRDMAFAPRGGPPTLARYADTQAD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AALRATQRELQREQGALTDKADAFSIARNRAQQEYDQAKESLRNWIATRSATGDASRNPD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VLARTRRLDELQQAVAGWQRQQDQIADQLDALRKRQDDVGARLAQSRAQAEWRYEQASRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YELVVFAWRLAFTLPILVFAVWLFVRYRKVRYWPFVYGFGMFALTAFFVELVPYLPSFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YVRVIVGIVLTVFAGVYMLRAFQRYVERKREEMRRSRRERAQAIGYEKAIAAYQKKLCPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CDKPWNLGGDGATFCIHCGLKLFDQCGGCGTRNFAFFPFCSGCGMPVSRAEGERRHAGGA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA