| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812393
Identifier: 237812393
GI number: 237812393
Start: 2114563
End: 2115633
Strand: Direct
Name: 237812393
Synonym: GBP346_A2141
Alternate gene names: NA
Gene position: 2114563-2115633 (Clockwise)
Preceding gene: 237812392
Following gene: 237812394
Centisome position: 51.59
GC content: 50.51
Gene sequence:
>1071_bases ATGGCCACCGAACTCGATCCTCCCGATTCATTCGATCCATTCGATTCGATCGACTCATACGATTTATTCGACTCTCTCGA CGAACGACAAACGAATTTCACGTTATCGTGCGCGATGGACTGGGGCCAGAATATCAAGAATCCCACCACGGACATCCTGG GTAAATTAATTATCGGCTATCTCGGCAAATCAACGAAGACGAAAAACAATAGATTTTCCATTGTCTGGGGTCCCGCGGTC TATGTCGACCCTCTTTCCGGATATGCCGCCAACGTAACCGCGATCTTCAAAAACACCAGCAACGACAAGGACTATCGCCT GGCATTCAGCGGAACCAATCCGAATTCACAGTTTGCCGATATAGTCATTGAAGACAATGACGTCAAAAATCTGACCCCGT TCTCGAAATATGTCAGCGATTGCCCGCCGGATGCGCTCATAGCAAACGGGACAGCCAAGGCATTGGACGTCACCCTTCAA ACCCTCCCCTCAAATAGCTCGGCATCGCTCACCGATTTCCTGAAAAATTTACCCAAAGGATCCACCCTCACCGTGACGGG GCATAGTCTCGGCGGCGTTCTGGCATCCACCTTCGCGCTATATTTCTCGCAATCCTCGGGTTACCCATTCAAAAACGTTT TCTGCCACTCTTTTGCAGCCGCCACCGCCGGAAACGTCGCATTCGCCGCATATTCAGACGGCTCGTTGACAGGAAAAATG AAGCGACTTTGGCATCGGTATGACGTCATTCCATCCTCGTGGAATTTATCCACGATGAACAGAATCAAGTATATTTACGA ACCCAATCTTTTCCCAACGGAGGACTTCATCCGCAAGATAAGAAAAATCGTCTATTACTTCTCCAACAAGCATATCTATT ACGCCCAGCCCGGATCGCTGGATCACTCCCAGCAATTCGAATTGGAAGGGGCATATCATTCCGGATTCAAGGTGTTCACG GATGAAGCCGGCTGGCAACACACGTTCGGATATCTGGCGCCGCTTTCCTTGACAGCCGATGATCTGAACGAGGGCCAGCC GTGGCAGCCGAGCCTTGGCACCCTCGCTTGA
Upstream 100 bases:
>100_bases GCGATACCCATATATTTTATTCGGGCAAGCACACTCACGAAGAGCTTGCAAATATCTTGAATTGCATGTCCCTACCCCGC CGAATTCAAGGAACACCATC
Downstream 100 bases:
>100_bases CCCACGACAGCGGGCGTTGGCACGCAAGGCTCCGTACGAGCCTTGCGAAGTTGCGCGCCCCGAAACGAGGCCACGCGCGG GCCGTGCGGGCGGTTGCGGA
Product: putative lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT DEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA
Sequences:
>Translated_356_residues MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT DEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA >Mature_355_residues ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAVY VDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQT LPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKMK RLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFTD EAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39421; Mature: 39290
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD HCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM CEEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL HHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEEHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD HCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM CEEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL HHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEEHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA