| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812394
Identifier: 237812394
GI number: 237812394
Start: 2115848
End: 2116222
Strand: Direct
Name: 237812394
Synonym: GBP346_A2142
Alternate gene names: NA
Gene position: 2115848-2116222 (Clockwise)
Preceding gene: 237812393
Following gene: 237812396
Centisome position: 51.62
GC content: 60.8
Gene sequence:
>375_bases ATGATCGCCGGCTTCGTCAACCTCACGCGCGGGCGCATCGATTCAGGACGACTCCTGTACGCCGCCGCTGCACCGCAATT CGAATTGCTCGCGATCTTTGCCGCGAATCCACACCGGCTCGCGCCCGACGCCCGACCAGGTCGCGCCACTGGCGGGATCG TAATATTTGGCCCGGACCTTTCGTCTGCCGTGCCCGCCGTCGGGAGGGAATACGTCGTCCAGGGAGAAGCCGAACTCGTC GACACACGCGCGTATCTCGGTGAGGACGGCTTCCTTGACCGCCCTGCGCTCGTCGGCCAAACGGGCCTCGAGTTCGATTT TGAGTTCCTTGAATCGCTGATATGCAATCATTTCGTCACACTCTCAAATTTCTGA
Upstream 100 bases:
>100_bases TCCCGGCATGACGTGTTTTCTTCGCGCGGGCCTTTTCATTTCGCCGTAGCGTGTCGCTTGCTCGGCCCGTCGGGCTGCGG CAAGACGGCAGACGCTGCGG
Downstream 100 bases:
>100_bases TCTCACATTTTTTGCCATTCGATTGAAATTCGTCGCTCGCGCAGTCTTGCATCGCCGTCAAAAAGCTTGCTCACGCGGAC CCGATAAAAAAAACGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MIAGFVNLTRGRIDSGRLLYAAAAPQFELLAIFAANPHRLAPDARPGRATGGIVIFGPDLSSAVPAVGREYVVQGEAELV DTRAYLGEDGFLDRPALVGQTGLEFDFEFLESLICNHFVTLSNF
Sequences:
>Translated_124_residues MIAGFVNLTRGRIDSGRLLYAAAAPQFELLAIFAANPHRLAPDARPGRATGGIVIFGPDLSSAVPAVGREYVVQGEAELV DTRAYLGEDGFLDRPALVGQTGLEFDFEFLESLICNHFVTLSNF >Mature_124_residues MIAGFVNLTRGRIDSGRLLYAAAAPQFELLAIFAANPHRLAPDARPGRATGGIVIFGPDLSSAVPAVGREYVVQGEAELV DTRAYLGEDGFLDRPALVGQTGLEFDFEFLESLICNHFVTLSNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13341; Mature: 13341
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAGFVNLTRGRIDSGRLLYAAAAPQFELLAIFAANPHRLAPDARPGRATGGIVIFGPDL CCCCCEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC SSAVPAVGREYVVQGEAELVDTRAYLGEDGFLDRPALVGQTGLEFDFEFLESLICNHFVT CCCCCCCCCEEEECCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE LSNF ECCC >Mature Secondary Structure MIAGFVNLTRGRIDSGRLLYAAAAPQFELLAIFAANPHRLAPDARPGRATGGIVIFGPDL CCCCCEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC SSAVPAVGREYVVQGEAELVDTRAYLGEDGFLDRPALVGQTGLEFDFEFLESLICNHFVT CCCCCCCCCEEEECCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE LSNF ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA