Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812279

Identifier: 237812279

GI number: 237812279

Start: 1976299

End: 1976586

Strand: Reverse

Name: 237812279

Synonym: GBP346_A2027

Alternate gene names: NA

Gene position: 1976586-1976299 (Counterclockwise)

Preceding gene: 237812283

Following gene: 237812277

Centisome position: 48.23

GC content: 68.06

Gene sequence:

>288_bases
GTGCGCCGTTCGACGGACCCGGATGCTTTCATCGACGAAAGCAAGCCCCGCGCGCTCACGCGATGCCGCGATGACGCAAC
GATTTACCGGTGCCGGATGGCGCTTCAAGCGAAACGTTCGGCGCACAGCTTCGCGGTTTTCGATGACGATCGCATGTCAT
GCAACGCGGTGTCGCGCATACCGCGGCCACCCGAGCCTTACGGGGCGCGCACCGTTGCCGCGCGGCCGGCGCGCATGCAT
CGGTCGCCGTCGCCGCGATCGCCGCGACCGGCCGGCTCGGGCGATTAA

Upstream 100 bases:

>100_bases
GAACCGCTTCACCGCCCTCGCCCGGTGGAGGGGCGATCGGGCGCCGAGGCCGGCCGTGGCGGCGCAAGCCCCGGCAACGC
GTACGGCATCGCGTCCATGG

Downstream 100 bases:

>100_bases
CAACCGCTGCGCATCAATGCGGCGCGGCGCGCGCGATCAATGTGTGCGATTGCGCAGTGTTTCTCTCACCCGCTTCGCGA
CGAGCACGGTCAGATAGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRRSTDPDAFIDESKPRALTRCRDDATIYRCRMALQAKRSAHSFAVFDDDRMSCNAVSRIPRPPEPYGARTVAARPARMH
RSPSPRSPRPAGSGD

Sequences:

>Translated_95_residues
MRRSTDPDAFIDESKPRALTRCRDDATIYRCRMALQAKRSAHSFAVFDDDRMSCNAVSRIPRPPEPYGARTVAARPARMH
RSPSPRSPRPAGSGD
>Mature_95_residues
MRRSTDPDAFIDESKPRALTRCRDDATIYRCRMALQAKRSAHSFAVFDDDRMSCNAVSRIPRPPEPYGARTVAARPARMH
RSPSPRSPRPAGSGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10644; Mature: 10644

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSTDPDAFIDESKPRALTRCRDDATIYRCRMALQAKRSAHSFAVFDDDRMSCNAVSRI
CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCC
PRPPEPYGARTVAARPARMHRSPSPRSPRPAGSGD
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRSTDPDAFIDESKPRALTRCRDDATIYRCRMALQAKRSAHSFAVFDDDRMSCNAVSRI
CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCC
PRPPEPYGARTVAARPARMHRSPSPRSPRPAGSGD
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA