Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is yetK [H]

Identifier: 237812283

GI number: 237812283

Start: 1979459

End: 1980397

Strand: Reverse

Name: yetK [H]

Synonym: GBP346_A2031

Alternate gene names: 237812283

Gene position: 1980397-1979459 (Counterclockwise)

Preceding gene: 237812284

Following gene: 237812279

Centisome position: 48.32

GC content: 74.76

Gene sequence:

>939_bases
ATGAAAACGAAACTCATCGGTTATCTGTCTCTCGCCGCGGCGATGATGGGCGTCGGCAGCACGGTCGTCGCGAGCCGCAT
CGCGGGCGATGGCCTGCCGCCCTTCACGGCCGCCGCGCTGCGCTTTCTGATCGCTTCGCCGCTGCTGTACGCGCTGATGC
GCGCGCAGCGGCTGCGCTGGCCGCGCCTCGCGCCGCGCGAGCTCGGGCTGCTCGTCGTGCAGGCGGCGTGCGGCGGCGTC
GGCTATACGGTGCTGCTGATCGTCGGCACGCGCCTGTCGTCGCCCGTCGACGCGGGCGTGATGCTCGGCACGCTGCCGGC
GATGTCGACGCTGATCGCGGCCGTCGTGCTGCGCGAGCGGCAGACGCCGCGCGACTGGGGCGCGGCCGCGCTCGCGACGG
CCGGCGTGCTGCTCGTCACGCTCACGCCGGGCCGCACGACGCTGTCGACGCGGGCGCTCGCGGGCGACGCGCTCGTGCTC
GCGGCGGTCGCGTGCGAGGCCGTCTTTATTTTGCTGAACCGCCGGCTTGCCGTGCCGCTCGCGCCGCTCACCCAGTCGAG
CGCGATGTCGGCGGCCGGCTGCGTGCTCGCGCTCGCGCCGGCGGCGTTCGAATGGCGCGCGGCGACGGCTGCCGCATGGC
AACCCGCCGCGCTCGCGGCGATCGCGTACTACGCGCTCGTGCCGACCGTGCTCGGCTATCTGTGCTGGTACGCCGGTTCC
GCGCGCACGAGCGGCACCGAGGCGGCGTTGTTCACGGCCGTGGCGCCGGCCTCGGCGGTGCTGTTCGCGGCGGCCGCGTT
CGGCGAGCCGCTCGACCGAACGCGGCTCGCCGGCATCGCGATGGTGGTGGCGGGGGTGCTGGTGGGCGCGATCCGGCCGC
GCTGCGGCGCGCATCGTCCACGCGAAGCCGCTGCGGCGAATTCGCGCGAAGCCGCCTGA

Upstream 100 bases:

>100_bases
ATGGTCCTCGCCATCGCCCGCTCCCCCCGCTTCCCGATCGCCGCCGCGCCGTTGCAATTTTGTTCAAGACGCGCTCCGCC
CGCGAGGCGACGATGCGGGC

Downstream 100 bases:

>100_bases
TGCGCGTCGCCGCCCGGGGCGATCACTCGCGCACGGCTCGGGCCTGCCGACAGATCCTCGGCTCGTCGCTCGCGACGGGC
CGCGCGGAGCGGCCGCCGCG

Product: integral membrane protein DUF6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKTKLIGYLSLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASPLLYALMRAQRLRWPRLAPRELGLLVVQAACGGV
GYTVLLIVGTRLSSPVDAGVMLGTLPAMSTLIAAVVLRERQTPRDWGAAALATAGVLLVTLTPGRTTLSTRALAGDALVL
AAVACEAVFILLNRRLAVPLAPLTQSSAMSAAGCVLALAPAAFEWRAATAAAWQPAALAAIAYYALVPTVLGYLCWYAGS
ARTSGTEAALFTAVAPASAVLFAAAAFGEPLDRTRLAGIAMVVAGVLVGAIRPRCGAHRPREAAAANSREAA

Sequences:

>Translated_312_residues
MKTKLIGYLSLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASPLLYALMRAQRLRWPRLAPRELGLLVVQAACGGV
GYTVLLIVGTRLSSPVDAGVMLGTLPAMSTLIAAVVLRERQTPRDWGAAALATAGVLLVTLTPGRTTLSTRALAGDALVL
AAVACEAVFILLNRRLAVPLAPLTQSSAMSAAGCVLALAPAAFEWRAATAAAWQPAALAAIAYYALVPTVLGYLCWYAGS
ARTSGTEAALFTAVAPASAVLFAAAAFGEPLDRTRLAGIAMVVAGVLVGAIRPRCGAHRPREAAAANSREAA
>Mature_312_residues
MKTKLIGYLSLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASPLLYALMRAQRLRWPRLAPRELGLLVVQAACGGV
GYTVLLIVGTRLSSPVDAGVMLGTLPAMSTLIAAVVLRERQTPRDWGAAALATAGVLLVTLTPGRTTLSTRALAGDALVL
AAVACEAVFILLNRRLAVPLAPLTQSSAMSAAGCVLALAPAAFEWRAATAAAWQPAALAAIAYYALVPTVLGYLCWYAGS
ARTSGTEAALFTAVAPASAVLFAAAAFGEPLDRTRLAGIAMVVAGVLVGAIRPRCGAHRPREAAAANSREAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31886; Mature: 31886

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLIGYLSLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASPLLYALMRAQRLRW
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRLAPRELGLLVVQAACGGVGYTVLLIVGTRLSSPVDAGVMLGTLPAMSTLIAAVVLRER
CCCCHHHHHHHHHHHHCCCCHHHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
QTPRDWGAAALATAGVLLVTLTPGRTTLSTRALAGDALVLAAVACEAVFILLNRRLAVPL
CCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHCCCC
APLTQSSAMSAAGCVLALAPAAFEWRAATAAAWQPAALAAIAYYALVPTVLGYLCWYAGS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARTSGTEAALFTAVAPASAVLFAAAAFGEPLDRTRLAGIAMVVAGVLVGAIRPRCGAHRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
REAAAANSREAA
HHHHHCCCCCCC
>Mature Secondary Structure
MKTKLIGYLSLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASPLLYALMRAQRLRW
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRLAPRELGLLVVQAACGGVGYTVLLIVGTRLSSPVDAGVMLGTLPAMSTLIAAVVLRER
CCCCHHHHHHHHHHHHCCCCHHHHHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
QTPRDWGAAALATAGVLLVTLTPGRTTLSTRALAGDALVLAAVACEAVFILLNRRLAVPL
CCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHCCCC
APLTQSSAMSAAGCVLALAPAAFEWRAATAAAWQPAALAAIAYYALVPTVLGYLCWYAGS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARTSGTEAALFTAVAPASAVLFAAAAFGEPLDRTRLAGIAMVVAGVLVGAIRPRCGAHRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
REAAAANSREAA
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]