Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812269

Identifier: 237812269

GI number: 237812269

Start: 1965919

End: 1966836

Strand: Reverse

Name: 237812269

Synonym: GBP346_A2017

Alternate gene names: NA

Gene position: 1966836-1965919 (Counterclockwise)

Preceding gene: 237812270

Following gene: 237812267

Centisome position: 47.99

GC content: 74.29

Gene sequence:

>918_bases
ATGGCGGCCGAATGCGCCGGCGCGCGAGCGCGTGCGGCCGCGCGCCGCCGCCGAGCCCCCGGAACACGGATATCGCCGCG
GCGCGCGCCCGGCGAATCCATTCGCGCGCCGTCCGCCGCGCCCCCGCCGGCCGCGCCCGTGCCGCCTGGATCCGCGCACG
CCACGCCGGCGCGCGGCACTTGCCCCTCGCCGAAGAACATGCCGCGCGACCCTCGATCGAGGGCCGCGCGGCGCGCTTTC
GCGACGGTTGGCCGATCGTCCGGATCGAATGCCCGCGTGACGGTCGAAAGCGCGGCGCCGCGGGGGGCGATGCCCATCGG
CATCCGCCATTCGACGCCATTCGATGCCCATCGATCTGGGCGGCATGTCGAGACCGCTTTGCGGGCACGCACTTCCCCGG
CGCTTGACGCCGACGGGCTCGCTGCCCGCCGGCGCGATGCAAGCATGAACGGCCGACGCACGCGGCCCCGTCCGAGCCCG
CTCTTGCGCTTCGGCGTTGACGACGTGTGGTTGCGCCCGCTGCGTTCCGGATGCCCGGCCGGCTCGATCGCGAAGGCGAA
AAGGATGAAAGTCCGCGCCCATCGCGCGCCGGCGCGTCAGGTGTCTCCGGGGCGACGCCCGCGGCAATCCGGCCGCCGAT
GCACGCGACGCAGCCCGCATGCGCTCAGCGCGCGGCCGATCCCCCTGCCTTGCGCGGCGCGTCATGGAACGCCCGCGACA
CTCGCCGCGTTCGGCCGGATGGGCTCGCGCCCGCTCGTTCATTCGCGTCGCCACGCAGCGACGACGATATTTCAATCGGG
CGGCATTGCGCCGCATCGGACGAGCAGGTTCGCCGAGCGCGCGCGATCGGCATCGCGCGCGCCGGCGCACCCCACCCGCC
GCATGCGCGTACGACAGCGACATGCACACCGATCCTAG

Upstream 100 bases:

>100_bases
CGCTCGGCGTGATCGGCCGATGGCTCGCGCCGGCGAGCGCGGCGCGCGAAGAAGGCGGCGCGTAGCGCACGAGTACGCGA
CAGGCGGCCGAATGCGGACG

Downstream 100 bases:

>100_bases
CACCGTTTGCACATGTTCCAGCGGCCTTCCGGCGTTTTTTGATCCATGACATAAAGTGCCGTTTAAATTGTTTCCAATCG
GTAAGCCATCGGGAAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAF
ATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSP
LLRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT
LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS

Sequences:

>Translated_305_residues
MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAF
ATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSP
LLRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT
LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS
>Mature_304_residues
AAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAFA
TVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPL
LRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPATL
AAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32835; Mature: 32704

Theoretical pI: Translated: 12.89; Mature: 12.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CPSPKNMPRDPRSRAARRAFATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHCC
RHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPLLRFGVDDVWLRPLRSGCPA
CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCC
GSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT
CHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQR
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HAHRS
HCCCC
>Mature Secondary Structure 
AAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CPSPKNMPRDPRSRAARRAFATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHCC
RHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPLLRFGVDDVWLRPLRSGCPA
CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCC
GSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT
CHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQR
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HAHRS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA