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The map label for this gene is cbiD [H]

Identifier: 237812247

GI number: 237812247

Start: 1947611

End: 1948705

Strand: Direct

Name: cbiD [H]

Synonym: GBP346_A1995

Alternate gene names: 237812247

Gene position: 1947611-1948705 (Clockwise)

Preceding gene: 237812246

Following gene: 237812248

Centisome position: 47.52

GC content: 73.42

Gene sequence:

>1095_bases
ATGATGCGCGACGAAACCCCCGAGCAGCCGGCGCCGCTGCGCTTCGGCTACACGACGGGCAGCTGCGCGAGCGCGACGTC
GCTCGCCGCCGCGCGCCTGCTGCTCACGGGCGTCGCGAGCGACACGGTCGACATCGTGCTGCCGAAGGGCCAGCACGTCG
CGATGCGCCTCGCGTTCTGCCGCGCGACCGACGACGGCGGCGCCGAGGCGGGCACGATCAAGGACGCGGGCGACGACCCC
GACGTCACGCACGGCGCGCTCGTGTTCGCGCGCGTGCGGCTCGTTCACGAGCCGGGCGTGCGCTTTCGCGCGGGGCCGGG
CGTCGGCACGGTCACGCGCGCGGGGCTGCCGATCGCCGTCGGCGAGCCGGCGATCAACCCGGTGCCGCGCCGGATGATGA
CCGAGCACCTCGCGGCGCTCGCGGCCGAGCACGGCTATGCGGGCGGCTTCGACGTCGCGATCGGCGTCGAGAACGGCGAG
GCGCTCGCGCGCAAGACGATGAACCCGCGCCTCGGCATCGTCGGCGGATTGTCGATTCTCGGCACGACGGGCATCGTGCG
GCCGTTCTCGTGCTCCGCGTACATCGCGTCGATTCATCAGGGGATCGACGTCGCGCGCGCCAACGGCGTCACGCACATCG
CCGCGTGCACCGGCAACGCGAGCGAGGACGCGGTGCGCGCGCGCTACGGCCTGCCCGACATCGCGCTGATCGAGATGGGC
GATTTCGCGGGCGCGGTGCTCAAGTACCTGCGCCGCGCGAGCGTCGCGCGGCTCACGCTGTGCGGCGGCTTCGGCAAGCT
GAGCAAGCTCGCGGCGGGCCATCTCGATCTGCACAGCCGCCATTCGAGCATCGATTTGCCGCTGCTCGCCGAATGGGCGG
GCGAAGCGGGCGCGAGCGCCGTGCTGCAGCACGAGATCCGCGCGGCGAACACGAGCCAGCAGGCGTTGGCGCTCGCGCTC
GCGCACCACGTGCCGCTCGGCGACGTCGTCTGCGCGCATGCGCGCCGCGTGGCGCGCGACATCGTGCCCGGCGAGGTCGA
CGTCGAGACGCTCGCGATCGACCGCGAGGGCCGCATCGTCGGCGTCGCGCCATGA

Upstream 100 bases:

>100_bases
CGCACGCGCAGCCGCTCGGCGGCTTCGACGCGTGGCGGCAGGCGCTGCCCGTCACGCTGTACGACGCGCGCAAGCCGCGC
GGCGCGCAGCCGGAGCACGC

Downstream 100 bases:

>100_bases
GCGTGCGCCGCGTGTTGCTGCTCGGCGGCACGGGCGACGCGCTGCGCACCGCGCGCGCGCTCGCGCCGCACGACGTGTAC
AGCCTCGCCGGCCTCGGCCG

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MMRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDP
DVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGE
ALARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMG
DFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALAL
AHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP

Sequences:

>Translated_364_residues
MMRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDP
DVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGE
ALARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMG
DFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALAL
AHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP
>Mature_364_residues
MMRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDP
DVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGE
ALARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMG
DFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALAL
AHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37727; Mature: 37727

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFC
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEE
RATDDGGAEAGTIKDAGDDPDVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAV
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCEEE
GEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEALARKTMNPRLGIVGGLSIL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECHHHH
GTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMG
CCCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECC
DFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASA
HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHH
VLQHEIRAANTSQQALALALAHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIV
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
GVAP
EECC
>Mature Secondary Structure
MMRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFC
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEE
RATDDGGAEAGTIKDAGDDPDVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAV
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCEEE
GEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEALARKTMNPRLGIVGGLSIL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECHHHH
GTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMG
CCCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECC
DFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASA
HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHH
VLQHEIRAANTSQQALALALAHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIV
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
GVAP
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA