| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812237
Identifier: 237812237
GI number: 237812237
Start: 1938642
End: 1938914
Strand: Direct
Name: 237812237
Synonym: GBP346_A1984
Alternate gene names: NA
Gene position: 1938642-1938914 (Clockwise)
Preceding gene: 237812236
Following gene: 237812246
Centisome position: 47.3
GC content: 74.36
Gene sequence:
>273_bases TTGTCCGCGCGCGGCGTCACGCCGCGTGAGACGCGCGCGGACGAGGCCGCGCCTCACGCGAGCGGCTTGCGCTTCGCGAA GTGGTGCGCCGTCGAGTATCGTCGTGCGTCGCTCGCGCGTTGCTCCACGCGTGGCCGGCTCGCCCGCCGTCGGGCACCCC GGATGGCGAGCGCCGCGAACCGCGGCTCGCATGCCGCGCGTCGTGTCTCGCGGGTCATGCGCCGGCTGTCGGACGCGGCG GCTTACCTACGACGGCCAAACGGCTGTCGATGA
Upstream 100 bases:
>100_bases TTCGGTGTGCATCGAGGAAATCGACGCGCTGCGCCGATGGCTGCATGCGCGGATCGCCGCGCTGCAAGCGGCGTGACCCG CCCGCCGGCGCGCCGGGGCT
Downstream 100 bases:
>100_bases ATGGCGCCGCTCGCCGCGCGCTCGCGCGCGGCGAGCGTCACGGCTGCGAATAGAAGCGATCGTTCTGCGCGCTGCGAGCG CGGCGGTGCGTCCGATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSARGVTPRETRADEAAPHASGLRFAKWCAVEYRRASLARCSTRGRLARRRAPRMASAANRGSHAARRVSRVMRRLSDAA AYLRRPNGCR
Sequences:
>Translated_90_residues MSARGVTPRETRADEAAPHASGLRFAKWCAVEYRRASLARCSTRGRLARRRAPRMASAANRGSHAARRVSRVMRRLSDAA AYLRRPNGCR >Mature_89_residues SARGVTPRETRADEAAPHASGLRFAKWCAVEYRRASLARCSTRGRLARRRAPRMASAANRGSHAARRVSRVMRRLSDAAA YLRRPNGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10052; Mature: 9920
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARGVTPRETRADEAAPHASGLRFAKWCAVEYRRASLARCSTRGRLARRRAPRMASAAN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC RGSHAARRVSRVMRRLSDAAAYLRRPNGCR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SARGVTPRETRADEAAPHASGLRFAKWCAVEYRRASLARCSTRGRLARRRAPRMASAAN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC RGSHAARRVSRVMRRLSDAAAYLRRPNGCR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA