| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yrhL [H]
Identifier: 237812025
GI number: 237812025
Start: 1714632
End: 1715816
Strand: Reverse
Name: yrhL [H]
Synonym: GBP346_A1766
Alternate gene names: 237812025
Gene position: 1715816-1714632 (Counterclockwise)
Preceding gene: 237812026
Following gene: 237812024
Centisome position: 41.86
GC content: 56.62
Gene sequence:
>1185_bases ATGCAAACACAGACAGCATCAAGCTCACATAGCAAAAATCTTGATATCGAGGTGCTGCGAGCCATCGCGATTCTAGGAAC GATGGTCTCGCACCTCGACATCCTGTTTTTTTGGGGAAGCAGCCGAATCGACACGCTCCAGCGGGCATTCTTCTTCTGGG GCGGAGTCGATCTATTCTTCTGCATTTCAGGCTACGTCATCACGGGGAACTTGCTGCGCACCCTTCCTTCTGGACGGCAA GGCGGGTTTGGAGCGTTCGCGATTCCATTCTGGATTCGACGTGCCTGGCGCATTCTTCCTTCAGCCTGGCTCTGGTTAGC CGCACCCTTGATTCTGAGCGTCGTGGCGAACCGCACCGGCTACCTCGGAACACCGAAGGGAAACATAATCGACGCTCTGT CGGCAGTCGCGCAGGTCGCCAACTTCCATTTTTGGTCGTGCTACGCCTTCCCGGCAACAACGTGCGGCATCGATCAGGTC TACTGGAGTTTGTCGCTCGAAGAGCAGTGCTACATCGTGCTCCCCGTCCTTCTGTACTTTGCAAACCGGCGCACGATCGC TCCGATCCTCTGCGTCGTGGTCCTGATTCAGGTGTTTCTACCGCGCCCTATTCTCTCACTCCTATGGTTCGTCAGGACGG ACGCCCTTGCCCTCGGCGCGCTGCTCGCGCTTCTTCAGCATCGTGACTGGTACGCGAAAGTCGAGCCGCGCCCCCTCGGG CGAGGTTTGATCTCCGCAATTGCTCTCGCAGGTATGTGCATCGTTTTGGCGGCACTCGCGGGATATCTAGCGAGGATTCC GTTTCATACGGGCCTCATCGCACTCATGTCGTGTGTCATGGTTTGGATCGCGAGCTATGGCCGAGGCTATACGATGCGAG ATGGTGCCGTGAAACGCGTACTCGTTTACTTCGGGTCCCGATCATACGCGATCTATCTGATCCACGTCCCCGTCTATCGC CTGACACGAGAAATCTGGGAGCGAATTGTCATCACCCCAAGCACCATTGGCGGTTCATTCACTCTTCATTTTGCCTTTAC CGCCATTCCGATCGTATTGGTGCTCGCGGAACTGAATTACCGATTTGTCGAGGCGCCGCTCAGGGTATACGGTGCGCGTT TGGCCGATCGGTGGGCGCACGCGCGTAACGTCGAAAACAGAAAATCGATCGCGAGCGTGCCGTAG
Upstream 100 bases:
>100_bases TCGGACAGCGCCGCGAACTGGCACTTGCCGCACCGATCCGACTCGAAATTCTGCGCTCAGCGGTATGGCAAAATCCGCCC AGCCACGGATTTCGCCACGT
Downstream 100 bases:
>100_bases GAAGCGATGCTCGCGACATCGGATAGCTGACCTGAAACGTTTCTTGCAGCCGTTCGGCAAGTGAGTGCTCTTTCCTCTCG GCCCGCTTGGGTCTCCCCGC
Product: acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQTQTASSSHSKNLDIEVLRAIAILGTMVSHLDILFFWGSSRIDTLQRAFFFWGGVDLFFCISGYVITGNLLRTLPSGRQ GGFGAFAIPFWIRRAWRILPSAWLWLAAPLILSVVANRTGYLGTPKGNIIDALSAVAQVANFHFWSCYAFPATTCGIDQV YWSLSLEEQCYIVLPVLLYFANRRTIAPILCVVVLIQVFLPRPILSLLWFVRTDALALGALLALLQHRDWYAKVEPRPLG RGLISAIALAGMCIVLAALAGYLARIPFHTGLIALMSCVMVWIASYGRGYTMRDGAVKRVLVYFGSRSYAIYLIHVPVYR LTREIWERIVITPSTIGGSFTLHFAFTAIPIVLVLAELNYRFVEAPLRVYGARLADRWAHARNVENRKSIASVP
Sequences:
>Translated_394_residues MQTQTASSSHSKNLDIEVLRAIAILGTMVSHLDILFFWGSSRIDTLQRAFFFWGGVDLFFCISGYVITGNLLRTLPSGRQ GGFGAFAIPFWIRRAWRILPSAWLWLAAPLILSVVANRTGYLGTPKGNIIDALSAVAQVANFHFWSCYAFPATTCGIDQV YWSLSLEEQCYIVLPVLLYFANRRTIAPILCVVVLIQVFLPRPILSLLWFVRTDALALGALLALLQHRDWYAKVEPRPLG RGLISAIALAGMCIVLAALAGYLARIPFHTGLIALMSCVMVWIASYGRGYTMRDGAVKRVLVYFGSRSYAIYLIHVPVYR LTREIWERIVITPSTIGGSFTLHFAFTAIPIVLVLAELNYRFVEAPLRVYGARLADRWAHARNVENRKSIASVP >Mature_394_residues MQTQTASSSHSKNLDIEVLRAIAILGTMVSHLDILFFWGSSRIDTLQRAFFFWGGVDLFFCISGYVITGNLLRTLPSGRQ GGFGAFAIPFWIRRAWRILPSAWLWLAAPLILSVVANRTGYLGTPKGNIIDALSAVAQVANFHFWSCYAFPATTCGIDQV YWSLSLEEQCYIVLPVLLYFANRRTIAPILCVVVLIQVFLPRPILSLLWFVRTDALALGALLALLQHRDWYAKVEPRPLG RGLISAIALAGMCIVLAALAGYLARIPFHTGLIALMSCVMVWIASYGRGYTMRDGAVKRVLVYFGSRSYAIYLIHVPVYR LTREIWERIVITPSTIGGSFTLHFAFTAIPIVLVLAELNYRFVEAPLRVYGARLADRWAHARNVENRKSIASVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 44019; Mature: 44019
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQTASSSHSKNLDIEVLRAIAILGTMVSHLDILFFWGSSRIDTLQRAFFFWGGVDLFF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCHHHHH CISGYVITGNLLRTLPSGRQGGFGAFAIPFWIRRAWRILPSAWLWLAAPLILSVVANRTG HHCCHHEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLGTPKGNIIDALSAVAQVANFHFWSCYAFPATTCGIDQVYWSLSLEEQCYIVLPVLLYF CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEECCCCCHHHHHHHHHHH ANRRTIAPILCVVVLIQVFLPRPILSLLWFVRTDALALGALLALLQHRDWYAKVEPRPLG HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH RGLISAIALAGMCIVLAALAGYLARIPFHTGLIALMSCVMVWIASYGRGYTMRDGAVKRV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH LVYFGSRSYAIYLIHVPVYRLTREIWERIVITPSTIGGSFTLHFAFTAIPIVLVLAELNY HHHCCCCCEEEEEEECCHHHHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCH RFVEAPLRVYGARLADRWAHARNVENRKSIASVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MQTQTASSSHSKNLDIEVLRAIAILGTMVSHLDILFFWGSSRIDTLQRAFFFWGGVDLFF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCHHHHH CISGYVITGNLLRTLPSGRQGGFGAFAIPFWIRRAWRILPSAWLWLAAPLILSVVANRTG HHCCHHEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLGTPKGNIIDALSAVAQVANFHFWSCYAFPATTCGIDQVYWSLSLEEQCYIVLPVLLYF CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEECCCCCHHHHHHHHHHH ANRRTIAPILCVVVLIQVFLPRPILSLLWFVRTDALALGALLALLQHRDWYAKVEPRPLG HCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH RGLISAIALAGMCIVLAALAGYLARIPFHTGLIALMSCVMVWIASYGRGYTMRDGAVKRV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH LVYFGSRSYAIYLIHVPVYRLTREIWERIVITPSTIGGSFTLHFAFTAIPIVLVLAELNY HHHCCCCCEEEEEEECCHHHHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCH RFVEAPLRVYGARLADRWAHARNVENRKSIASVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]