Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812026

Identifier: 237812026

GI number: 237812026

Start: 1716525

End: 1717727

Strand: Reverse

Name: 237812026

Synonym: GBP346_A1768

Alternate gene names: NA

Gene position: 1717727-1716525 (Counterclockwise)

Preceding gene: 237812027

Following gene: 237812025

Centisome position: 41.91

GC content: 66.33

Gene sequence:

>1203_bases
ATGCCCCTCAAGATCGCGTGGTACACCGCGGCACTCGCCGCGACGCTTGCCGCATGCGGCGGCGGTGGCGGTGGCGGCGG
CTCGACGACATCGAACCCGAACGGCACTGGCGTCACGCCGTCCAGCGCGGCGAACGTGCAACCCGTGACGGTGTCCGCGG
GCATCACCGGCGCGGCGAACATGCTGATGACGAGCGTCACCGTTTGCGTGCCGAATACGAACCAATGCCAGACGATCGAC
AACGTGCAGGTGGATACCGGCTCGGACGGCTTGCGCATCCTTGCGGCCGCGCTGCCGTCGAGCGTCGCGCTACCTGTCGT
GCCGGCCGCGAATGCGCCGATCACGGGCGCGTGCGCGATATTCGGCACGGGCTTTACATGGGGCGCGGTGCGTCGCGCCG
ATGTGAGGATCGCGGGCGAGATCGCGGCGAACATCCCGATTCAGGTGATCGCCGATTCGAGCACGCCGAACGCGCCCATC
GACTGCACGCAGAGCGCCGGGCCCATGCAAACGCAAGGGGCGCTGCGTGCGAACGGCATCCTCGGCATCGGCCTCTTCGT
CACCGACTGCGGCACTGCTTGCGCCAACAGCGCGCTGCCCGGCTGGTATTACGGGTGCACGACGAGCGGCACATGCGCAA
GCACATCGCAACCGATCGCGCAGCAAATTGCGAATCCGATCGGCGCATTCGCGAGCGACAACAACGGCTCGATAATCGTG
CTGCCCGCGATTTCACCGACCGGCGCGGCGACGGTCAACGGCTCGCTGATCTTCGGCATCGGCACCCAGGCGAACAACGG
GCTCGGCACCGCTACGCCGCTCGTGACGACCGCATCGGACGCTTACGTGACGAGCGTGCTCAACGGCAACACCAACGCGC
GCACGTTCTTCGATAGCGGCTCGAACGGGATCTTCTTCGCGGACGCGTCGCTGCCGCAGTGCGGTTCGTGGTTCTGCCCG
GCGAGCACGCAGACGTTCGACATCACGCTGAGCAGCGGCAACGGCGCGTCGAAAGCGACGACGTTCCAGGTCGCGAGTTC
GCAGGTGCTGTTCTCGACGTTCAACTTCGCCTTCAACGACCTTGCCGGGCCGATCGGTAATGTCGTCGATCTCGGACTGT
CGTTCTTCTATGGGCGCAACGTCTATACGGCGCTCGAAGGCAGCGCGACGCCGGCAGGCCCGGGGCCGTACTACGCGTAC
TGA

Upstream 100 bases:

>100_bases
GAAGCCGGCGGCCGCATGCGCGCGTATGTGGGCCGCGCGTGGCTGCCCGGCGCGGTGCCGCCCGGCGTGTCGATCGACGA
CTTGCGGTGAGGAGACGGCC

Downstream 100 bases:

>100_bases
ACGCTGAGCGGAACGTGCGCCGCCCGGTTGGGGACGCCGCGCGAAGCTCGCCGGCGAGGCAGCGCGCCCCGTCGATCCGC
ATTGACCGATACACATCGAT

Product: Gly/Ala/Ser-rich lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MPLKIAWYTAALAATLAACGGGGGGGGSTTSNPNGTGVTPSSAANVQPVTVSAGITGAANMLMTSVTVCVPNTNQCQTID
NVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPI
DCTQSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIV
LPAISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCP
ASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY

Sequences:

>Translated_400_residues
MPLKIAWYTAALAATLAACGGGGGGGGSTTSNPNGTGVTPSSAANVQPVTVSAGITGAANMLMTSVTVCVPNTNQCQTID
NVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPI
DCTQSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIV
LPAISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCP
ASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY
>Mature_399_residues
PLKIAWYTAALAATLAACGGGGGGGGSTTSNPNGTGVTPSSAANVQPVTVSAGITGAANMLMTSVTVCVPNTNQCQTIDN
VQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPID
CTQSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVL
PAISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCPA
STQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39825; Mature: 39694

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKIAWYTAALAATLAACGGGGGGGGSTTSNPNGTGVTPSSAANVQPVTVSAGITGAAN
CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH
MLMTSVTVCVPNTNQCQTIDNVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAI
HHEEEEEEEECCCCCCEEECCEEEECCCCCHHHHEECCCCCCCEEEEECCCCCCCEEEEE
FGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDCTQSAGPMQTQGALRANGI
EECCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCE
LGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIV
EEEEEEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE
LPAISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSG
EECCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECC
SNGIFFADASLPQCGSWFCPASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFND
CCEEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHH
LAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLKIAWYTAALAATLAACGGGGGGGGSTTSNPNGTGVTPSSAANVQPVTVSAGITGAAN
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH
MLMTSVTVCVPNTNQCQTIDNVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAI
HHEEEEEEEECCCCCCEEECCEEEECCCCCHHHHEECCCCCCCEEEEECCCCCCCEEEEE
FGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDCTQSAGPMQTQGALRANGI
EECCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCE
LGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIV
EEEEEEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE
LPAISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSG
EECCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECC
SNGIFFADASLPQCGSWFCPASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFND
CCEEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHH
LAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA