| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811885
Identifier: 237811885
GI number: 237811885
Start: 1562361
End: 1564769
Strand: Direct
Name: 237811885
Synonym: GBP346_A1625
Alternate gene names: NA
Gene position: 1562361-1564769 (Clockwise)
Preceding gene: 237811883
Following gene: 237811886
Centisome position: 38.12
GC content: 57.66
Gene sequence:
>2409_bases ATGAGTTATCGTTTCGCATCCGCCGACCGATTTGATGTTAATGTCGTTACGAAAGACGAGCAGGACGCTATTTTGCGGAG GCTGCATGAAGATGACGGCATGGCTTGTTGTAAGACATTGCATATCGGAATCTTCTTTGATGGTACGCGTAACAACGCTG ATCGGGATAGGGGGGCGCGAACGGAAAGCAATGTGGCACGGCTTTATGCCGCTTTTCCAATAGATAAATATCACCAAGCG ATTTACGTTGCTGGAGTTGGCACGCCTTTTGTCGAGCAGATTGGTGATTTCGGTGTTGGCTTACAGGCGGCCGCAGGAGC TGCGGCAGGTTGGGCGGGAGAGGGGCGAATTAACTGGGCTTTGCTTCGGATTCACGATATTTTGCATGCGTATGTTCACG GTCAGACGTTAACGGCAGTGTTAGGAAAGCGCTACGAGGAACTCGTAAAATCGATGAGCCTCGATATGAATTTTAAGGGC ATCGACCTTGGCGGAACGCCGCCTAAACCGGGAAGCTTCGGCGATATCAAATTGCGTGCCAATTCTGGTGTGGGGGCGCT CAAGCTGATTGCTGCCGAACAGAATGGTGTCGAGCTGACTTGGGATTTAGATACGAATTGGGCGCAGCTCAAAAACGAGT TGGATTCGTCGAAGTGGAATGCAGCCGTGCAAGAATGGGACGCCAAGCGCCGCAAGGTATTGCTCGATCGTCGTGCTCAG CTAAAAGCGCGCATCGGTGATCTGCTGGTCAAGGGGAAGCCGAAGCTGCAACGCATTCGGCTATACGTATTCGGTTTTTC GCGCGGCGCAGCGGAGGCTCGCACTTTCTCGAACTGGCTTGCTGACGCGCTTGACCCCGATTTCAGTTTGTGTGGAGTGC CGGTTTCATACGATTTTCTCGGCATCTTTGATACGGTCGCATCGGTCGGCATCGCTCAGAGCGCCGCCGCAACATTATTC GACGGACATGGAGGATGGGGGCGCAAGGAACTGATGGCCGTGCCGCATTATGTGCGCCGTTGCGTGCACATGGTGGCGGC ACATGAACCTCGTGGATCATTTCCGCTCGACCTTATCGATTGTTCGATGGACGGTCGTGAGGAGATTGTCTACCCGGGTG TTCACTCGGACGTCGGCGGCGGCTATGGGCCGGGCGAACAGGGGCGCGGTCGGGACGACGCCGACAAACTTTCGCAAGTC CCGCTGCTTGATATGTACCGGGAGGCGCGTAAGGCAGGTGTGCCCTTGGATATCAATGGGCCGGGTATCGGCGCGGACGT CATCGCTGCATTCAAGGTTTCAGCAGGGCTAAAACAAGCCTTCGCAGCCTACGTAAAAAAGAGCGAGAACTATTATTACG AGAAAGATCACGGCACGCCGGGCCTAATGCGTTGCCATTACGGCTTGTATCTCCGGTGGCGCAAGATGCGGCTCAAGGAC ATGCATGCACAGCCCAGCTTCAAGGCTGCGCAGGCGCGCTATCCGCAAGATGCAGCGGATCTGGACAGTGCGAACGCGGA ATTGAAGGAGGAGTGGAACGATTTGCTGGAGGTCGAGAAAGCTGGCGGCCCGACAATCACCCGATACGTGGAGAAGTTTG TTACGAAATGGGCCAGTGAGAATCCGAAAACGGCCGCCGTCGTTTCCACGTCTCTACTTCCGGCCGCGGTCGCTGCTGAG ATTTTTGTTCCGGGGGTTAGCGCTGCGACGGTTCTATTCGGCGACAAAGTGGTGAAACTGGTGCAAGCCCAACTCAAGGA GAAGTGGGAGCAGTGGCTGCAAGTTCGCAGCGACTGGAACATGGGGCCGCCTGAACCTGCGATCAGCGCACTCTACGACA ACTACATGCACGACTCCCGCGCATGGTTCAAGCCGCTCGGCGACGATGACGACGTGTGGAACCATAGGCAGATTCAGGAA CTCAAGACCAAGCAAGCCAGCTTTGAACGCGCCCATGCTGCCTGGAAAAAGCGTGTCGAAATGGGCATGCCAAGCCCGTT GCAGGTTACACAGGCAATGGGCGTAGGTTCCACAGGATGGGGGCCCGTCGGCGGGCTTCCGCCCGAACCCGAACCCCGCT CCCCGCTCACCGCCCAGCAAGCCGATCTGCTCAAGCGCTACGACGCCGCGATGCAGTCCGCCAAGCAGGCACGCGCCGCA AAGGACCCGAACGCGCCGACGGACAGCGCCGTGCTGACCGATCCGAAGGTGACGGGCGGCCTCGCGCTGCAAACCAGCGG CCGCGAGTTCTATTTCCTGTGGGGCTTCCTGCGCTGGCGGACCGTGTTCGTGAACGGCGTGCGCTGGGACCAGCCGCGCG TGCCGACGGTGCAGGAGGAAATGGAGGGCATGCGCATGCAGATGCAGCGCCAGGTCGACATGAAGGGCATCGGCGTACTG TTCCAATGA
Upstream 100 bases:
>100_bases TTCCAGAAGGGCTGCAAGCACCAAATGTGGCCTGCCCCGGGCATTTCACCTTATTGAACAGTGACCCGCGATGCCCCGCG CCTGATAACAGGATCAAGCC
Downstream 100 bases:
>100_bases GCGAGCACGCAAGCGTGGCCGGCGATCGCGCACCGGCCGAAGCCCGCGCAATGACGCGCATCGAACGCGATCGCCGAGCG CGAGCGCACACGGGTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 801
Protein sequence:
>802_residues MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQA IYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKG IDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLF DGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQV PLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAE IFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQE LKTKQASFERAHAAWKKRVEMGMPSPLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVL FQ
Sequences:
>Translated_802_residues MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQA IYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKG IDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLF DGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQV PLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAE IFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQE LKTKQASFERAHAAWKKRVEMGMPSPLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVL FQ >Mature_801_residues SYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAI YVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGI DLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQL KARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFD GHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVP LLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKDM HAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEI FVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQEL KTKQASFERAHAAWKKRVEMGMPSPLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAAK DPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLF Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88763; Mature: 88632
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGAR CCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHEEEEEEEEECCCCCCCHHCCCC TESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWA CHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEH LLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEE NSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ CCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFL HHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHH GIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLID HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE CSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDING CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEECCC PGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASE HCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NPKTAAVVSTSLLPAAVAAEIFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWN CCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVE CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGMPSPLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEE CCCCCCCCCCEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHEECEECCCCCCCCHHHH MEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure SYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGAR CCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHEEEEEEEEECCCCCCCHHCCCC TESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWA CHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEH LLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEE NSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ CCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFL HHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHH GIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLID HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE CSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDING CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEECCC PGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASE HCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NPKTAAVVSTSLLPAAVAAEIFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWN CCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVE CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGMPSPLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEE CCCCCCCCCCEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHEECEECCCCCCCCHHHH MEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA