| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811883
Identifier: 237811883
GI number: 237811883
Start: 1561217
End: 1561774
Strand: Direct
Name: 237811883
Synonym: GBP346_A1623
Alternate gene names: NA
Gene position: 1561217-1561774 (Clockwise)
Preceding gene: 237811882
Following gene: 237811885
Centisome position: 38.09
GC content: 61.11
Gene sequence:
>558_bases ATGTGCTGGCTTGCGCTGCTGGGGAGTGTTGCGGCGTGCTCGCGGGCGGTGAGCGAAGTGTCGCCGCAGGCGGGCGCGAA AGGCGCGGCGGTGTCGCAGGCGGGCGACGACACGATGAGTCTGAAGCTGAATGCGTTGAACGATACGGATGTGCCGATCG GCGCATTTTACGTAGACGGTACGTGGGGCAGTACTGTTGCGTCGCGCATAGGTAGCGGTGGCGGACAAATGATCTGCTGT GTGTCTGCGCCGGGTAAGTGGCATCCCGGCTTGACTGTCACGTTGCGGTGGCAAGACGACACGCTGTACAAGAAGGACCC GGACGCGATGGCGAGCCGGGTGGTTTCCGTCGGGAAGCACGAGCATTTCTCCGACGGATTTCTATGGGTGCTGTTTTTTC CGAATGACAGGATCAAGGTGTACGCATCGCAATGGATGCCCGGTTTTCCGGGGTTCCCGGAAGGGTTGCAGACGCCGGAC AGCGCGTGTCCGGAGCACTTCACGCCGCTGAGCGACGATCCGCGCTGTTCGCAGCCTGGCAAGAGAATCAAATTATGA
Upstream 100 bases:
>100_bases GGGAGGGCGTGGGACAGTGCCGTCGTCCATGCGATCACGGATTCCGCGCTTGACGTCGGCAGTGCCTGGGCGCCGGACGA GGGAAACGATTGTTCGGTTG
Downstream 100 bases:
>100_bases ATAAGTGCTTTGTTAAATTGAATGGACTTATTGCGTTGTTTGTGTTTGCGATTTTGATGTGTGGCGGCTGTTCGCGTACA TCGAAAAGCTCGTCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MCWLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC VSAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SACPEHFTPLSDDPRCSQPGKRIKL
Sequences:
>Translated_185_residues MCWLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC VSAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SACPEHFTPLSDDPRCSQPGKRIKL >Mature_185_residues MCWLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC VSAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SACPEHFTPLSDDPRCSQPGKRIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19820; Mature: 19820
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEECC TWGSTVASRIGSGGGQMICCVSAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKH CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC EHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPDSACPEHFTPLSDDPRCSQPG CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KRIKL CCCCC >Mature Secondary Structure MCWLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEECC TWGSTVASRIGSGGGQMICCVSAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKH CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC EHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPDSACPEHFTPLSDDPRCSQPG CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KRIKL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA