| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811870
Identifier: 237811870
GI number: 237811870
Start: 1547175
End: 1547735
Strand: Reverse
Name: 237811870
Synonym: GBP346_A1610
Alternate gene names: NA
Gene position: 1547735-1547175 (Counterclockwise)
Preceding gene: 237811871
Following gene: 237811869
Centisome position: 37.76
GC content: 68.63
Gene sequence:
>561_bases GTGCTCGCCGGCGCCGCCCTCGTCTCGCTTCCGGCATGCGCGGCCGAATCGCGCGAGATCGCGCATCGCCCGTGGGGGGC GATCGAGCCGGCCGAAGCGGCGCCGGACATCGAAGTATCGCTTGCCGACGGCACGCGCGGCCGCCTCGTCGATCTGTTGC GCGGCAAGACGAGCGCCATCCAGTTCGTGTTCACCGGATGCAGCGCCACGTGCTCGCTGCAGGGCGCGATATTCCAATCG TTACAGGCGCAACTCGCGCGGCATCCGATCGGCGGCGCGCAGTTGCTGTCGATCAGCATCGATCCGGCGAACGACACGGC CGTCGCGATGACGGCCTGGCTGAGGCGCTTCGGCGCGCAGCCCGGCTGGCAAGCGGCGATTCCCGCGAGCGGCGATCTCG CGCGGCTCGCGCGCCTGTATCGCGACGAACGCAACCCGGCCGACAGCCATATCGACCAGGCATTCATCTCGAGCCGCTCG GCCCGGTTCGTCTGGAAAACGGATCACCTGCCCACGCCCGAATCCGTCCACGACGCATTGCGCTATTACGCGTCGCATTG A
Upstream 100 bases:
>100_bases GACGCGACCGACGCGCAATGCGCGGACCTGTGGGCCTTCCTGATTCCGATACCGACATCACGTTGAGATGAACCCTCCAT CCCTGATCCGGCGCCGCCTC
Downstream 100 bases:
>100_bases AATCGACGCAGCCTCGTCCCGACCCGATACGATCTCATTCGAAACATGCAACTCCGCACGCTTCTGCTCGCGCTCGCGAT TGTCGCGATCGCCGTCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLAGAALVSLPACAAESREIAHRPWGAIEPAEAAPDIEVSLADGTRGRLVDLLRGKTSAIQFVFTGCSATCSLQGAIFQS LQAQLARHPIGGAQLLSISIDPANDTAVAMTAWLRRFGAQPGWQAAIPASGDLARLARLYRDERNPADSHIDQAFISSRS ARFVWKTDHLPTPESVHDALRYYASH
Sequences:
>Translated_186_residues MLAGAALVSLPACAAESREIAHRPWGAIEPAEAAPDIEVSLADGTRGRLVDLLRGKTSAIQFVFTGCSATCSLQGAIFQS LQAQLARHPIGGAQLLSISIDPANDTAVAMTAWLRRFGAQPGWQAAIPASGDLARLARLYRDERNPADSHIDQAFISSRS ARFVWKTDHLPTPESVHDALRYYASH >Mature_186_residues MLAGAALVSLPACAAESREIAHRPWGAIEPAEAAPDIEVSLADGTRGRLVDLLRGKTSAIQFVFTGCSATCSLQGAIFQS LQAQLARHPIGGAQLLSISIDPANDTAVAMTAWLRRFGAQPGWQAAIPASGDLARLARLYRDERNPADSHIDQAFISSRS ARFVWKTDHLPTPESVHDALRYYASH
Specific function: Unknown
COG id: COG1999
COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19957; Mature: 19957
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGAALVSLPACAAESREIAHRPWGAIEPAEAAPDIEVSLADGTRGRLVDLLRGKTSAI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHE QFVFTGCSATCSLQGAIFQSLQAQLARHPIGGAQLLSISIDPANDTAVAMTAWLRRFGAQ EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC PGWQAAIPASGDLARLARLYRDERNPADSHIDQAFISSRSARFVWKTDHLPTPESVHDAL CCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH RYYASH HHHHCC >Mature Secondary Structure MLAGAALVSLPACAAESREIAHRPWGAIEPAEAAPDIEVSLADGTRGRLVDLLRGKTSAI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHE QFVFTGCSATCSLQGAIFQSLQAQLARHPIGGAQLLSISIDPANDTAVAMTAWLRRFGAQ EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC PGWQAAIPASGDLARLARLYRDERNPADSHIDQAFISSRSARFVWKTDHLPTPESVHDAL CCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH RYYASH HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA