| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811828
Identifier: 237811828
GI number: 237811828
Start: 1504154
End: 1504603
Strand: Reverse
Name: 237811828
Synonym: GBP346_A1568
Alternate gene names: NA
Gene position: 1504603-1504154 (Counterclockwise)
Preceding gene: 237811829
Following gene: 237811827
Centisome position: 36.71
GC content: 66.67
Gene sequence:
>450_bases GTGGCCGGACTGGCGCAGATCGACGAGCGCGGCTTCGTCGAGCGCGTTCGGCAGGATCTCGTGAAGGAGAATCCGGCGTT TGCCGACGACGGCGGTCTGTCGTCCCGGTTGTGGACCGCGTATCGCGCCGCGCGCACGTTCGGCATCGAGCGGGACGAGA ACGTCGTCGCGTTCCTGCGGCTCGAAGCGTACGCGCCGGGCTTCTACGAAAAGCCCGCGACGAAGGCTTGGCTCACGCGC CCCGGCCGCTCGGCCGACGCGCGCTTTCATGATTACTTGCGCGTCATCAAATGGCGTATCGAACATCCGGACGGAGGGCT GGAACATGGCGGGATTGGTATTTCCGGTAATAGAAGCGGCGGCGGTGGAGCTTGGGCCGATCTTGGCGCGCGTTGGCGTC GCCTTGTTGGGCGGCGCGACGGTGGCGGGAACGGCGAGTCTGTCGGGTGA
Upstream 100 bases:
>100_bases CAGCGCTCGCAATTCTTCGTCGCGACGTACGACTGGCTCGTCGAGATCGACGGGCGGCTGACCGGAGTGCATCCGCATGC TTGAACTGAGCGCAGAACAG
Downstream 100 bases:
>100_bases CACGCCGAAGGAGGACAGCAAGGCGACGCCGGATGTGCGGGCGTTGCCGCGCACGGGCGAAAGCTGCAAGAAATGCCCGC CCGAGAGTGGAGCAAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARTFGIERDENVVAFLRLEAYAPGFYEKPATKAWLTR PGRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSGGGGAWADLGARWRRLVGRRDGGGNGESVG
Sequences:
>Translated_149_residues MAGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARTFGIERDENVVAFLRLEAYAPGFYEKPATKAWLTR PGRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSGGGGAWADLGARWRRLVGRRDGGGNGESVG >Mature_148_residues AGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARTFGIERDENVVAFLRLEAYAPGFYEKPATKAWLTRP GRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSGGGGAWADLGARWRRLVGRRDGGGNGESVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16369; Mature: 16238
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARTFGIERDENVVAFLR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE LEAYAPGFYEKPATKAWLTRPGRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSG EECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC GGGAWADLGARWRRLVGRRDGGGNGESVG CCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARTFGIERDENVVAFLR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE LEAYAPGFYEKPATKAWLTRPGRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSG EECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC GGGAWADLGARWRRLVGRRDGGGNGESVG CCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA