Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811827

Identifier: 237811827

GI number: 237811827

Start: 1503676

End: 1504197

Strand: Reverse

Name: 237811827

Synonym: GBP346_A1567

Alternate gene names: NA

Gene position: 1504197-1503676 (Counterclockwise)

Preceding gene: 237811828

Following gene: 237811826

Centisome position: 36.7

GC content: 58.81

Gene sequence:

>522_bases
TTGGGCGGCGCGACGGTGGCGGGAACGGCGAGTCTGTCGGGTGACACGCCGAAGGAGGACAGCAAGGCGACGCCGGATGT
GCGGGCGTTGCCGCGCACGGGCGAAAGCTGCAAGAAATGCCCGCCCGAGAGTGGAGCAAAGATTCGCCGCAATCATGGCG
TCAACTGGAATGCGTACCGATATCAGGCACGCATTACTGGCTTTGCGTTCGACACTGAGGAATGCCGCTGGAGCGACGAG
TGGAATTGGCTCGGCATTGACTTCGACGGCTTCCAGCCCGGCGAATGCTTGCTACAGGAAACCAAGGGCAACTACGATCA
GTTCCTCGATGGTTCTATCCCGAAGGCCGACAAATTTTTCAAAGGATTCGACTCGATGGAAGCCACTGCCATACGACAGA
GCGCGGCCGTGCGGGCCAATCCGCCAGCACGACTGATGTGGTACTTCCAAACGCCACTCGCGCGACAACGCATGCTTACT
GTATTGAGACGGTTGGGCATTACCTCGACTCTTCAACCCTGA

Upstream 100 bases:

>100_bases
CCGGACGGAGGGCTGGAACATGGCGGGATTGGTATTTCCGGTAATAGAAGCGGCGGCGGTGGAGCTTGGGCCGATCTTGG
CGCGCGTTGGCGTCGCCTTG

Downstream 100 bases:

>100_bases
GATCCTCGATGAACATCACCGCCAGTTTCCGCGATGCTTCACTCGTCGCATTCGATTTTCCCGAGATCTTGACGCGGATA
TCGAAAATCATCGACGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDE
WNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLT
VLRRLGITSTLQP

Sequences:

>Translated_173_residues
MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDE
WNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLT
VLRRLGITSTLQP
>Mature_172_residues
GGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYRYQARITGFAFDTEECRWSDEW
NWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFFKGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTV
LRRLGITSTLQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19329; Mature: 19198

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYR
CCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHCCCCCCCEEE
YQARITGFAFDTEECRWSDEWNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFF
EEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHH
KGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTVLRRLGITSTLQP
HCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GGATVAGTASLSGDTPKEDSKATPDVRALPRTGESCKKCPPESGAKIRRNHGVNWNAYR
CCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHCCCCCCCEEE
YQARITGFAFDTEECRWSDEWNWLGIDFDGFQPGECLLQETKGNYDQFLDGSIPKADKFF
EEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHH
KGFDSMEATAIRQSAAVRANPPARLMWYFQTPLARQRMLTVLRRLGITSTLQP
HCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA