| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811815
Identifier: 237811815
GI number: 237811815
Start: 1489822
End: 1491399
Strand: Direct
Name: 237811815
Synonym: GBP346_A1555
Alternate gene names: NA
Gene position: 1489822-1491399 (Clockwise)
Preceding gene: 237811814
Following gene: 237811816
Centisome position: 36.35
GC content: 56.72
Gene sequence:
>1578_bases TTGCAAAAATCGTTCTCGTCAATCGAGATTAAATCTGTTCAAGAAGATCGGCGAGAGATAGAGGGTATCGCCTCAACTCC GACGCCTGACAGGGTAAATGACGTGGTAGAGCCTCTGGGCCTCACGTTCCAGAAAGAAACGCCCCTCCTACTTAATCACA AGTCCGACCAGCCTGTAGGCACGGTGCAATTCGGCACGCCTACCGCTAAGGGACTTCCCTTCAAGGCAAAGATTGCGAAG GTGGACGAAGAAGGCGTTGTGAAGCAGCGCACCGACGAAGCGTGGCATAGCGTCAAGACGCGCCTTATCAGGGGCGTCTC TATTGGGTTCATCGCCAGGGCAACCAGCCCGCTCCCGAATGGTGGGACCCGGTTCACAAAAGCGGAAGTCCATGAGTTGT CGCTTACCGCGATTCCCGCTAATCCGGAAGCAAAGATTACGGGGTTCAAGGCACTTCCGGAAGTGCCTGACAGCGCGCGG CCGACCCTCGACCTATCCATCCTTCCGCCTGAACTTGCTGCGATGTACACGGCGGGGTTGGCGCGACGCGAAGCTGAGCA GAAGGCCGCCGAAGCAGCACGTAAAGAGCAAGAAACCATCAACACGAAAGAGGAAAACGATATGCAGAAGACGAACAACA CTAACCACATTTTCATTCGCGGCGCTATCGCGAAGGCCGTGACGATGGAGGGCGGGGCAGAGGGCTACGCGTCGATGCGG TGGGGGGCGGGTTCGAAAACGGTGGAGTACATCAAGGCGATTGCTAGCCCCATGACGGCCGGCGTAGACGGAAGCGGTGC ATTGACCTCAGGTACTTTGAGTCGCCAGCAGTTCGTCCAAGCTGTGTTTAGTCATTCGATCCTCGGGCAGCTTCGGGGGG TGATTCGTGTACCGGCGATGACGCGCGTCAATGTGGAAAATGAGCCAACAGCCGCTGCGTTCTTCGGCCCCGGCGTGCCT TGTCCGACTGCACAAGGCACGTTCGGGGTGCATATGGCCGACAAGCGAAAGATCGGCGTCACAGAAGTGATCTCGGAAGA ACTCGCCCGTGCTACCGATGAAGCGGCTGAGGTAACTATTAGTGCGATTCTCCAACGTGCCCTGAGTCGAGGGTTGGATA ACGCATTCATTGGAAGCCAAACACGGGGCGAGGTTTCCCCTGCTGGCCTTGGGACGGTTGCAGTAAAAGCCGCAAATTTT GAGGCAGGCCTTGAAGTGTTTACAGGCGACCTGACCATGGCAAGTGTGATTGTCAATCCACGTACAGCAGTCGCTTTGCG CAGCCCGACCGAAACTCAGATTACCGCGACCGGGGGCATCTACAAGGGGCTGCCCGCAATCGCATCATGCGCCGTTCCTC TGGGCAAACTTCTAATTGTGGATGGTAGTCGGGTGCTGGCTCATATCGGAGACGTGGAGATTCTCGCACTTCGTCATGCT GACGTATACACATTGCATGGAGGTGCGTCCCCCTCGGTCCCGGTCAACATGTTTCAGACCAATCAAGTAGCCCTCCAGGC GGGCCAGTACGCAGACTGGGATTTCGTTGACGGTGCTGCTATTGAGGTTGGGGTCTAA
Upstream 100 bases:
>100_bases TACGGCCTGCTGTAACTGACCAGTGCCGCGAACCCGTCGAAGCCGGGGGCGGGTTCGTTCTTGATCTTACAGGAATCAAC CACTAACAATAAGGACTGCG
Downstream 100 bases:
>100_bases CACGGACACTCTACGAAGAAGAAAGCGAGTAGGGCGGTGAGATGCCGCCCGCACAATAAAATTTGAATTAGGATAACTAT GTCAATTTCAATCGCTGCAA
Product: putative prohead protease
Products: NA
Alternate protein names: Caudovirus Prohead Protease; Phage Head Maturation Protease; Bacteriophage Protein; Phage Head Protein/Prohead Proteinase; Phage-Related Protein; Prohead Protease
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MQKSFSSIEIKSVQEDRREIEGIASTPTPDRVNDVVEPLGLTFQKETPLLLNHKSDQPVGTVQFGTPTAKGLPFKAKIAK VDEEGVVKQRTDEAWHSVKTRLIRGVSIGFIARATSPLPNGGTRFTKAEVHELSLTAIPANPEAKITGFKALPEVPDSAR PTLDLSILPPELAAMYTAGLARREAEQKAAEAARKEQETINTKEENDMQKTNNTNHIFIRGAIAKAVTMEGGAEGYASMR WGAGSKTVEYIKAIASPMTAGVDGSGALTSGTLSRQQFVQAVFSHSILGQLRGVIRVPAMTRVNVENEPTAAAFFGPGVP CPTAQGTFGVHMADKRKIGVTEVISEELARATDEAAEVTISAILQRALSRGLDNAFIGSQTRGEVSPAGLGTVAVKAANF EAGLEVFTGDLTMASVIVNPRTAVALRSPTETQITATGGIYKGLPAIASCAVPLGKLLIVDGSRVLAHIGDVEILALRHA DVYTLHGGASPSVPVNMFQTNQVALQAGQYADWDFVDGAAIEVGV
Sequences:
>Translated_525_residues MQKSFSSIEIKSVQEDRREIEGIASTPTPDRVNDVVEPLGLTFQKETPLLLNHKSDQPVGTVQFGTPTAKGLPFKAKIAK VDEEGVVKQRTDEAWHSVKTRLIRGVSIGFIARATSPLPNGGTRFTKAEVHELSLTAIPANPEAKITGFKALPEVPDSAR PTLDLSILPPELAAMYTAGLARREAEQKAAEAARKEQETINTKEENDMQKTNNTNHIFIRGAIAKAVTMEGGAEGYASMR WGAGSKTVEYIKAIASPMTAGVDGSGALTSGTLSRQQFVQAVFSHSILGQLRGVIRVPAMTRVNVENEPTAAAFFGPGVP CPTAQGTFGVHMADKRKIGVTEVISEELARATDEAAEVTISAILQRALSRGLDNAFIGSQTRGEVSPAGLGTVAVKAANF EAGLEVFTGDLTMASVIVNPRTAVALRSPTETQITATGGIYKGLPAIASCAVPLGKLLIVDGSRVLAHIGDVEILALRHA DVYTLHGGASPSVPVNMFQTNQVALQAGQYADWDFVDGAAIEVGV >Mature_525_residues MQKSFSSIEIKSVQEDRREIEGIASTPTPDRVNDVVEPLGLTFQKETPLLLNHKSDQPVGTVQFGTPTAKGLPFKAKIAK VDEEGVVKQRTDEAWHSVKTRLIRGVSIGFIARATSPLPNGGTRFTKAEVHELSLTAIPANPEAKITGFKALPEVPDSAR PTLDLSILPPELAAMYTAGLARREAEQKAAEAARKEQETINTKEENDMQKTNNTNHIFIRGAIAKAVTMEGGAEGYASMR WGAGSKTVEYIKAIASPMTAGVDGSGALTSGTLSRQQFVQAVFSHSILGQLRGVIRVPAMTRVNVENEPTAAAFFGPGVP CPTAQGTFGVHMADKRKIGVTEVISEELARATDEAAEVTISAILQRALSRGLDNAFIGSQTRGEVSPAGLGTVAVKAANF EAGLEVFTGDLTMASVIVNPRTAVALRSPTETQITATGGIYKGLPAIASCAVPLGKLLIVDGSRVLAHIGDVEILALRHA DVYTLHGGASPSVPVNMFQTNQVALQAGQYADWDFVDGAAIEVGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55551; Mature: 55551
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSFSSIEIKSVQEDRREIEGIASTPTPDRVNDVVEPLGLTFQKETPLLLNHKSDQPVG CCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEECCCCCCCE TVQFGTPTAKGLPFKAKIAKVDEEGVVKQRTDEAWHSVKTRLIRGVSIGFIARATSPLPN EEEECCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC GGTRFTKAEVHELSLTAIPANPEAKITGFKALPEVPDSARPTLDLSILPPELAAMYTAGL CCCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH ARREAEQKAAEAARKEQETINTKEENDMQKTNNTNHIFIRGAIAKAVTMEGGAEGYASMR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCEEEE WGAGSKTVEYIKAIASPMTAGVDGSGALTSGTLSRQQFVQAVFSHSILGQLRGVIRVPAM CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCE TRVNVENEPTAAAFFGPGVPCPTAQGTFGVHMADKRKIGVTEVISEELARATDEAAEVTI EEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH SAILQRALSRGLDNAFIGSQTRGEVSPAGLGTVAVKAANFEAGLEVFTGDLTMASVIVNP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEEEECC RTAVALRSPTETQITATGGIYKGLPAIASCAVPLGKLLIVDGSRVLAHIGDVEILALRHA CEEEEECCCCCCEEEECCCHHHCHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEEECC DVYTLHGGASPSVPVNMFQTNQVALQAGQYADWDFVDGAAIEVGV CEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEECC >Mature Secondary Structure MQKSFSSIEIKSVQEDRREIEGIASTPTPDRVNDVVEPLGLTFQKETPLLLNHKSDQPVG CCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEECCCCCCCE TVQFGTPTAKGLPFKAKIAKVDEEGVVKQRTDEAWHSVKTRLIRGVSIGFIARATSPLPN EEEECCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC GGTRFTKAEVHELSLTAIPANPEAKITGFKALPEVPDSARPTLDLSILPPELAAMYTAGL CCCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH ARREAEQKAAEAARKEQETINTKEENDMQKTNNTNHIFIRGAIAKAVTMEGGAEGYASMR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCEEEE WGAGSKTVEYIKAIASPMTAGVDGSGALTSGTLSRQQFVQAVFSHSILGQLRGVIRVPAM CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCE TRVNVENEPTAAAFFGPGVPCPTAQGTFGVHMADKRKIGVTEVISEELARATDEAAEVTI EEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH SAILQRALSRGLDNAFIGSQTRGEVSPAGLGTVAVKAANFEAGLEVFTGDLTMASVIVNP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEEEECC RTAVALRSPTETQITATGGIYKGLPAIASCAVPLGKLLIVDGSRVLAHIGDVEILALRHA CEEEEECCCCCCEEEECCCHHHCHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEEECC DVYTLHGGASPSVPVNMFQTNQVALQAGQYADWDFVDGAAIEVGV CEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA