| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811805
Identifier: 237811805
GI number: 237811805
Start: 1477487
End: 1477804
Strand: Reverse
Name: 237811805
Synonym: GBP346_A1544
Alternate gene names: NA
Gene position: 1477804-1477487 (Counterclockwise)
Preceding gene: 237811806
Following gene: 237811804
Centisome position: 36.06
GC content: 63.52
Gene sequence:
>318_bases ATGTCTTCGAACACCCCGCCCTCCGCATCGCACAGCCCGCTCTATCTGAATCTGCTCGGCGAAACCGCGAAGATCGACTG GTGCGATCTCGAGCGCTTTTTCGCGCAAGGCAAACTGTTGTCGGTCGCGCGCGATCTCGATCTCGTGAGCGTTGCCGAAG CGATCGCAAGTGACGACAAGGAACAGGTCACGCGCTGGCTGTCCGCGGGGCACGTCGAGCGAATGCAGGCCGGCACCGCG CAGGATTACGCGACGCGCAATCCCGAGCTGTGGGCGGTCGTCGTATCGCCGTGGGTGTGCGTGCAGGCACGCTCGTAA
Upstream 100 bases:
>100_bases CACGCCGCCGCCCGCCGCGAAACCCGTCCGAACGGCCGAGTCTCGCCGCCCGGGCGAATGGTTTATAGTGGCGCTCACTG TCGTTCCGTCTCCTCATGCC
Downstream 100 bases:
>100_bases CACCGCGATGTCCGCCTCCTCCCCTCCGACGCACGCAGACGAAGACCCCGAGCCGCGCGCTGCCGCGAACGGGCATCGGC GCGTGCTCGGCCTCGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTA QDYATRNPELWAVVVSPWVCVQARS
Sequences:
>Translated_105_residues MSSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTA QDYATRNPELWAVVVSPWVCVQARS >Mature_104_residues SSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTAQ DYATRNPELWAVVVSPWVCVQARS
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11575; Mature: 11444
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDK CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCH EQVTRWLSAGHVERMQAGTAQDYATRNPELWAVVVSPWVCVQARS HHHHHHHHCCCHHHHHCCCCCHHCCCCCCEEEEEECCEEEEEECC >Mature Secondary Structure SSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDK CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCH EQVTRWLSAGHVERMQAGTAQDYATRNPELWAVVVSPWVCVQARS HHHHHHHHCCCHHHHHCCCCCHHCCCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA