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The map label for this gene is dinF [H]

Identifier: 237811804

GI number: 237811804

Start: 1476088

End: 1477404

Strand: Reverse

Name: dinF [H]

Synonym: GBP346_A1543

Alternate gene names: 237811804

Gene position: 1477404-1476088 (Counterclockwise)

Preceding gene: 237811805

Following gene: 237811802

Centisome position: 36.05

GC content: 69.7

Gene sequence:

>1317_bases
GTGCTCGGCCTCGCGTTGCCCATCATCGCGGCCAATCTCACGCAGCCGATTCTCGGCGCGGTCGACACCGCCGTCGCCGG
TCACCTGAACGGCCCGCAATATCTCGGCGGCGTCGCACTCGGCGGCCTCTTCTTCAATTTCGTGTACTGGGGCTTCGGCT
TCCTGCGAATGGGGACGACGGGGCTCGTCGCGCAAGCGTTCGGCGCGAACGACCTCGCCGGAATCCGCATCAACGTACTG
CGCGCGCTCCTGCTCGCGTTCACGCTCGGCGCGGCGGTGCTCGCGCTGCAAACGCCGCTGCTCGGCATCGCGTTCGCCGC
GCTCGGCGGCAGCGATTCGGTTCGCTCGACTGCGCTCGAATACGCGCACGCGCGGATCTGGGCCGCGCCGTTCGCGCTCG
CGAATTACGTCGTGCTCGGCTATCTGCTCGGCATGCAACGCGTGCGTCTCGCACTCGTGATCCAGGTGCTCGTGAACGTC
GTCAACATCGGCGCGGTGCTGCTCTACGTGTACCGCTTCGATTGGGGCGTCGCAGGCATCGGCGCCGCGACCGCGACGGC
CGACATCGCCGGCTTCGCGGCGAGCGCGCTGCTGCTGCGCTGGCTGAACCCGCGCGGCCTCGCGAAGATCAGGCGCGTCG
AGCTCTTCGATCGCGCGGCGCTCGCACGTCTCGTCGCGCTCAATCGCGACATCTTCATCCGCACGCTGTGTCTGCTGTCG
GCGTTCGGCTGGTTCGCGCATCTCGGTGCGCGCCAAGGCGACGCGACGCTCGCCGCCAACGCGCTGCTGCTCAATTTCCA
GACCTTCATGGCGTACGCGCTCGACGGCTTCGCGCATGCGGCGGAAGCGCTTGTCGGCGCGGCGGCCGGCGCGCGCAATC
GCGATGCATTCCGCCAAGCGCTGCGCACGACGTTCTTCTGGGCGGGGATCGGCGCGCTCGCGTTCGCGCTCGCCTATTGG
TGCGCGGGCGGCTGGATCGTTGCGCAACTCACCGATCAGCCGTCCGTGCGGGGCGTCGCCGAACGTTATCTCCCGTGGGC
CGCGCTCTCACCGGTGATTTCCGTCTGGGGTTTCATGCTCGACGGCGTGTTCATCGGCGCGACGCACACGCGCGCGCTGA
TGCGGGCCATGGCGACATCGTTCGCGCTGTTCGTCGCCGCAACGCTCGCGCTGGTCGGCCCGCTCGGCAATCACGGGCTC
TGGATCGCATTGCTCGTGTTCATGGCCGCGCGCGGCGCGACGCTCGCGCGCCGTCTGCCGGGGCTCGAGCGAGCCGTCGC
ACCGGATGCGGCGCGAGCGCCGAGCGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
GTGCAGGCACGCTCGTAACACCGCGATGTCCGCCTCCTCCCCTCCGACGCACGCAGACGAAGACCCCGAGCCGCGCGCTG
CCGCGAACGGGCATCGGCGC

Downstream 100 bases:

>100_bases
CCCGCATGCCGGCCGCGTAGCCCTACAGCGGAAACACGGCGAAAGCACGGCCGAAGCGCGGCGGCAATCCGCATCGCCCA
TCGCCCATTGCCCGCCTCCG

Product: DNA-damage-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFNFVYWGFGFLRMGTTGLVAQAFGANDLAGIRINVL
RALLLAFTLGAAVLALQTPLLGIAFAALGGSDSVRSTALEYAHARIWAAPFALANYVVLGYLLGMQRVRLALVIQVLVNV
VNIGAVLLYVYRFDWGVAGIGAATATADIAGFAASALLLRWLNPRGLAKIRRVELFDRAALARLVALNRDIFIRTLCLLS
AFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRDAFRQALRTTFFWAGIGALAFALAYW
CAGGWIVAQLTDQPSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRAMATSFALFVAATLALVGPLGNHGL
WIALLVFMAARGATLARRLPGLERAVAPDAARAPSAAG

Sequences:

>Translated_438_residues
MLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFNFVYWGFGFLRMGTTGLVAQAFGANDLAGIRINVL
RALLLAFTLGAAVLALQTPLLGIAFAALGGSDSVRSTALEYAHARIWAAPFALANYVVLGYLLGMQRVRLALVIQVLVNV
VNIGAVLLYVYRFDWGVAGIGAATATADIAGFAASALLLRWLNPRGLAKIRRVELFDRAALARLVALNRDIFIRTLCLLS
AFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRDAFRQALRTTFFWAGIGALAFALAYW
CAGGWIVAQLTDQPSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRAMATSFALFVAATLALVGPLGNHGL
WIALLVFMAARGATLARRLPGLERAVAPDAARAPSAAG
>Mature_438_residues
MLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFNFVYWGFGFLRMGTTGLVAQAFGANDLAGIRINVL
RALLLAFTLGAAVLALQTPLLGIAFAALGGSDSVRSTALEYAHARIWAAPFALANYVVLGYLLGMQRVRLALVIQVLVNV
VNIGAVLLYVYRFDWGVAGIGAATATADIAGFAASALLLRWLNPRGLAKIRRVELFDRAALARLVALNRDIFIRTLCLLS
AFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRDAFRQALRTTFFWAGIGALAFALAYW
CAGGWIVAQLTDQPSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRAMATSFALFVAATLALVGPLGNHGL
WIALLVFMAARGATLARRLPGLERAVAPDAARAPSAAG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=418, Percent_Identity=43.0622009569378, Blast_Score=242, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 46092; Mature: 46092

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHCCCCCCCCCCCCC
>Mature Secondary Structure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CCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]