| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811504
Identifier: 237811504
GI number: 237811504
Start: 1193907
End: 1194500
Strand: Reverse
Name: 237811504
Synonym: GBP346_A1234
Alternate gene names: NA
Gene position: 1194500-1193907 (Counterclockwise)
Preceding gene: 237811505
Following gene: 237811502
Centisome position: 29.14
GC content: 66.84
Gene sequence:
>594_bases ATGCGGCGCGCCTCCCCCGTTCCTTGCCTGAACGAGATGGAAACGATCAAAGCTTTCAACGATGCACGTCGGCAGATCCA GGAATCGGTGCTCGAACTGTTCAAGGGCCTGTCGCTCAGGGAGCGCCTGCTGCAAGGCGTGCTGATGGCCGTGCAGGCCG CGAGCGGCGCTTGCCTCGCGTACGGAATCGGCCGCGCGCTGCACACCGAGCAGGCCGTATGGGCGGCGATCACCGCGATC GCGGTCACGCAGCACAACTACGCGGACACGATCAATCTGTCGCGCGATCAGTTCATCGGCGCGATGGTGGGCGGGCTGAT CGGCTTCGCGGGGGCGGCGACGGGCGCCGGCCATTTCGTCGCGTACGCGATCACGATCGTGACGGCGATCATCTGCTGCT GGTGTCTGAACGTCGGCAGCGCGGCCCGGCTCGGCGCGATCACCGCGACAATCGTGCTGCTGTTTCCGGGTGAGGGCCCG CTGTGGGACATTCCGCTCGTGCGGTTGGGCGAAGTGACGCTCGGCACCGCGTGCGCGATGGCGGTCGGCTGGACGATGTC GCGAATCGAGCGGCGCTGGTTCGCGAAGCGTTGA
Upstream 100 bases:
>100_bases CCCACGGTCGCCACCGCCGCTCGCCGGCGCGGCGCCGCCACCGCGTCGCGCCCGTATCGAGGGCGCGGCGACCGGCTCGT TCGCCCGCCGCCGAGCCGGT
Downstream 100 bases:
>100_bases AGCGGCGGCGAACGCGCGAAGACGGCGGGCGTGAAAACGACAGCGGCAAGCGCAAGAAAGCGCGCGACGCGAAACGATGC TGAACCATGCTGCCCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRRASPVPCLNEMETIKAFNDARRQIQESVLELFKGLSLRERLLQGVLMAVQAASGACLAYGIGRALHTEQAVWAAITAI AVTQHNYADTINLSRDQFIGAMVGGLIGFAGAATGAGHFVAYAITIVTAIICCWCLNVGSAARLGAITATIVLLFPGEGP LWDIPLVRLGEVTLGTACAMAVGWTMSRIERRWFAKR
Sequences:
>Translated_197_residues MRRASPVPCLNEMETIKAFNDARRQIQESVLELFKGLSLRERLLQGVLMAVQAASGACLAYGIGRALHTEQAVWAAITAI AVTQHNYADTINLSRDQFIGAMVGGLIGFAGAATGAGHFVAYAITIVTAIICCWCLNVGSAARLGAITATIVLLFPGEGP LWDIPLVRLGEVTLGTACAMAVGWTMSRIERRWFAKR >Mature_197_residues MRRASPVPCLNEMETIKAFNDARRQIQESVLELFKGLSLRERLLQGVLMAVQAASGACLAYGIGRALHTEQAVWAAITAI AVTQHNYADTINLSRDQFIGAMVGGLIGFAGAATGAGHFVAYAITIVTAIICCWCLNVGSAARLGAITATIVLLFPGEGP LWDIPLVRLGEVTLGTACAMAVGWTMSRIERRWFAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21106; Mature: 21106
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00099 THIOLASE_3 ; PS00457 NA_SOLUT_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRASPVPCLNEMETIKAFNDARRQIQESVLELFKGLSLRERLLQGVLMAVQAASGACLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH YGIGRALHTEQAVWAAITAIAVTQHNYADTINLSRDQFIGAMVGGLIGFAGAATGAGHFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH AYAITIVTAIICCWCLNVGSAARLGAITATIVLLFPGEGPLWDIPLVRLGEVTLGTACAM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCEECCCHHHHCCHHHHHHHHH AVGWTMSRIERRWFAKR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRASPVPCLNEMETIKAFNDARRQIQESVLELFKGLSLRERLLQGVLMAVQAASGACLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH YGIGRALHTEQAVWAAITAIAVTQHNYADTINLSRDQFIGAMVGGLIGFAGAATGAGHFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH AYAITIVTAIICCWCLNVGSAARLGAITATIVLLFPGEGPLWDIPLVRLGEVTLGTACAM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCEECCCHHHHCCHHHHHHHHH AVGWTMSRIERRWFAKR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA