Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811505

Identifier: 237811505

GI number: 237811505

Start: 1194804

End: 1196057

Strand: Reverse

Name: 237811505

Synonym: GBP346_A1235

Alternate gene names: NA

Gene position: 1196057-1194804 (Counterclockwise)

Preceding gene: 237811506

Following gene: 237811504

Centisome position: 29.18

GC content: 71.13

Gene sequence:

>1254_bases
ATGACGGTCCGGCATGCGGTCAGCGCGCGTAGCCTGCGCGCCCTCGACTGGCTCAACTTCTTCGTCGCGAACGTGCAGAC
AGGCTTCGGTCCGTTCATCGCGTCGTATCTCGCGTCGCACAAGTGGACGCAGGGCGAAATCGGCATGGTGCTGTCGATCG
GCACGATCAGCGCGATGGTGAGCCAGGTGCCCGGCGGCGCGGCCGTCGATGCGCTGAAGAACAAGAAAGGCGCCGCCGCG
TGGGCGATCGCCGCGATCATCCTGTCCGCGGTGCTGCTCGCCGCGAGCCCGACCGTCGTGCCCGTGATCGCGGCCGAGGT
GTTCCACGGCTTCGCGAGCTGCATGCTCGTGCCGGCAATGGCGGCGATCTCGTTCGCGCTCGTCGGCCGCGAGAGCCTGG
GCGACCGGCTCGGCCGCAACGCGCGCTGGGCGTCGCTCGGCAGCGCGGTCGCGGCGGGCCTGATGGGGCTCACGGGCGAG
TACTTCTCCGCGCGCGCGGTGTTCTGGCTGACGGCGGCCCTCGCGCTGCCCGCGCTCGTCGCGCTCGCGATGATCGAGCC
GACGCACCATCATCATCACGCGGCGCCACGCGCCGACGCCGACGAAGACGAAGACGAAGAACGCGAAACGCTGCGCGAAC
TGCTGCGCGACAAGCGGATGCTGATCTTCGCCGCCTGCGTCGTGTTGTTCCATCTGTCGAACGCGGCGATGCTGAACCTC
GCCGCGGGCGAAGTGACGGCGGGCATGGGCGAGAACGTGCAGCTCGTGATCGCCGCGTGCATCATCGTCCCGCAGGCGAT
CGTCGCGATGCTCTCGCCGTGGGTCGGACGCTCCGCGCAGCGCTGGGGCCGCCGGCCGATCCTGCTGCTCGGTTTCGCCG
CGCTGCCGCTGCGCGCGCTGCTGTTCGCCGGCGTCTCGAGCCCGTACCTGCTCGTGCCGGTGCAGATGCTCGACGGCATC
AGCGCCGCCGTGTTCGGCGTGATGCTGCCGCTCATCGCGGCGGACGTCGCGGGCGGCAAGGGGCGCTACAACCTGTGCAT
CGGGCTCTTCGGACTCGCGGCGGGCGTCGGCGCGACGCTCAGCACCGCGCTCGCCGGCTTCGCGGCCGACCACTTCGGCA
ACGCGATGAGCTTCTTCGGGCTCGCCGCCGCGGGCGCGCTCGCGACGCTGCTCGTGTGGTTCGCGATGCCCGAGACGCGC
GACGCGGCGCTCGCCGAAGACGCTCGGCACTCGAGCGCCGAGCCGGCGCAGTAA

Upstream 100 bases:

>100_bases
CGCCGCCCTATGCGGGCGACAAGCCGATCCTCGCCGTCTCGCCCGCGGCCGGCGGCGCTCCCGCCGCCGCGCCGGCCACC
GCTCGAGCAGGTGCGAAACG

Downstream 100 bases:

>100_bases
CGTCCCGCCCGTGATGCGACGGCGCGCGGGACGCGATGCGGGATGCGGCGGCACATGCATGCGTGCGCCCGGCGGCGTTG
CAGGCGATATGGGCGATATG

Product: transporter, major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMVLSIGTISAMVSQVPGGAAVDALKNKKGAAA
WAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGE
YFSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRADADEDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAMLNL
AAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQMLDGI
SAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETR
DAALAEDARHSSAEPAQ

Sequences:

>Translated_417_residues
MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMVLSIGTISAMVSQVPGGAAVDALKNKKGAAA
WAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGE
YFSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRADADEDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAMLNL
AAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQMLDGI
SAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETR
DAALAEDARHSSAEPAQ
>Mature_416_residues
TVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMVLSIGTISAMVSQVPGGAAVDALKNKKGAAAW
AIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEY
FSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRADADEDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAMLNLA
AGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQMLDGIS
AAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETRD
AALAEDARHSSAEPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43442; Mature: 43311

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMVLSIGTISAMV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH
SQVPGGAAVDALKNKKGAAAWAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAM
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEYFSARAVFWLTAALALPALV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALAMIEPTHHHHHAAPRADADEDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAMLNL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
AAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRAL
ECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEHHHHHHHHHHH
LFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATL
HHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
STALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETRDAALAEDARHSSAEPAQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMVLSIGTISAMV
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH
SQVPGGAAVDALKNKKGAAAWAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAM
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEYFSARAVFWLTAALALPALV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALAMIEPTHHHHHAAPRADADEDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAMLNL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
AAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRAL
ECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEHHHHHHHHHHH
LFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATL
HHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
STALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETRDAALAEDARHSSAEPAQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]