Click here to switch to the map view.

The map label for this gene is prsW [H]

Identifier: 229918696

GI number: 229918696

Start: 2947189

End: 2947845

Strand: Direct

Name: prsW [H]

Synonym: EAT1b_2983

Alternate gene names: 229918696

Gene position: 2947189-2947845 (Clockwise)

Preceding gene: 229918693

Following gene: 229918697

Centisome position: 98.24

GC content: 47.18

Gene sequence:

>657_bases
ATGATCGCAATCGCCTTGTCTGCGGTTGCACCTGGGCTCGCCCTTCTTTCCTACTTCTATCTGCGCCATGAGTTAGAGGC
AGAACCGCTCGGATATGTGATTCGTTCTTTCGTGGCCGGAGCCGTTCTCGTGTTTCCGATCATGTTTATCCAATATGCGT
TCGTTGAAGAGGGAGTGCTTACTGGACCGTTTTGGCAGGCGTATGTCGCCACTGCCTTGCTTGAAGAGTTTTTTAAATGG
TTTATGATTTATTATACAATATATATACATAAAGTCTTTGATGATTACTACGACGGGATTCTCTATGCGGTCGCCTGCTC
ATTAGGCTTTGCGACTTTAGAGAATTTTTTATACTTATGGGTGTACGATTCATTAGAAATTGCGATTTGGCGAGCGATCC
TGCCTGTGAGCGGGCACGCTTTGTTCGCTGTCGTGATGGGGTACTGTTTGGGGCGAGCGAAGCATTCGGCACGCGAACGG
CTCTGGCTGTTCATGGCGGTCTTTTCCGCGACCGTCATCCACGGAACGTTTGATTTTATTTTGATACTCGAACCGAATCA
AAAGCTTCCTGCCGTGCTTTATATCGTCATTTTATGGACCGTGGCACTTTTGCTCGTGCGAGCGGCCAACTTATCCAATC
GTCGTCAATTTAAATAA

Upstream 100 bases:

>100_bases
CTCCTAATTATTTTTATGAAGATTTCCATTTTCTAGGCGTTCTCTACTTTTTCTTTCAGACAATTCAGTGTATGCTAGGG
AGAGAAAGGAGAGATGCATC

Downstream 100 bases:

>100_bases
AGGGGAAGAGTCAGCATGTTAAAAGAAGGTCAAGAATTGAGAATCGAAGTGGAAGGGCGTGCAGAGGGGAAAACGAAAAT
TGCGGCCATCACCGATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Protease responsible for activating sigma-W [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIAIALSAVAPGLALLSYFYLRHELEAEPLGYVIRSFVAGAVLVFPIMFIQYAFVEEGVLTGPFWQAYVATALLEEFFKW
FMIYYTIYIHKVFDDYYDGILYAVACSLGFATLENFLYLWVYDSLEIAIWRAILPVSGHALFAVVMGYCLGRAKHSARER
LWLFMAVFSATVIHGTFDFILILEPNQKLPAVLYIVILWTVALLLVRAANLSNRRQFK

Sequences:

>Translated_218_residues
MIAIALSAVAPGLALLSYFYLRHELEAEPLGYVIRSFVAGAVLVFPIMFIQYAFVEEGVLTGPFWQAYVATALLEEFFKW
FMIYYTIYIHKVFDDYYDGILYAVACSLGFATLENFLYLWVYDSLEIAIWRAILPVSGHALFAVVMGYCLGRAKHSARER
LWLFMAVFSATVIHGTFDFILILEPNQKLPAVLYIVILWTVALLLVRAANLSNRRQFK
>Mature_218_residues
MIAIALSAVAPGLALLSYFYLRHELEAEPLGYVIRSFVAGAVLVFPIMFIQYAFVEEGVLTGPFWQAYVATALLEEFFKW
FMIYYTIYIHKVFDDYYDGILYAVACSLGFATLENFLYLWVYDSLEIAIWRAILPVSGHALFAVVMGYCLGRAKHSARER
LWLFMAVFSATVIHGTFDFILILEPNQKLPAVLYIVILWTVALLLVRAANLSNRRQFK

Specific function: Is responsible for Site-1 cleavage of the RsiW anti- sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sig

COG id: COG2339

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protease prsW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24924; Mature: 24924

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIALSAVAPGLALLSYFYLRHELEAEPLGYVIRSFVAGAVLVFPIMFIQYAFVEEGVL
CEEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGPFWQAYVATALLEEFFKWFMIYYTIYIHKVFDDYYDGILYAVACSLGFATLENFLYLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VYDSLEIAIWRAILPVSGHALFAVVMGYCLGRAKHSARERLWLFMAVFSATVIHGTFDFI
EECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LILEPNQKLPAVLYIVILWTVALLLVRAANLSNRRQFK
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIAIALSAVAPGLALLSYFYLRHELEAEPLGYVIRSFVAGAVLVFPIMFIQYAFVEEGVL
CEEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGPFWQAYVATALLEEFFKWFMIYYTIYIHKVFDDYYDGILYAVACSLGFATLENFLYLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VYDSLEIAIWRAILPVSGHALFAVVMGYCLGRAKHSARERLWLFMAVFSATVIHGTFDFI
EECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LILEPNQKLPAVLYIVILWTVALLLVRAANLSNRRQFK
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA