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The map label for this gene is cheD [H]

Identifier: 229918652

GI number: 229918652

Start: 2898390

End: 2898875

Strand: Direct

Name: cheD [H]

Synonym: EAT1b_2939

Alternate gene names: 229918652

Gene position: 2898390-2898875 (Clockwise)

Preceding gene: 229918651

Following gene: 229918653

Centisome position: 96.62

GC content: 51.85

Gene sequence:

>486_bases
ATGGCTGATGTATTAAAAATCGGCATTGCCGAATGGAAGCAGACGACCGCACCAAATCGGCTACGTACAGCCGGGCTCGG
ATCATGTGTGGGTGTCATTTTGTATGACACCCGCCTCCAATTGGCGGCGATGGCACATGTCATGTTGCCGGACTCGACGA
TTGCTCGTAAGAACCAGACGATTGAAGTAGGAAAATACGCAGATACAGCCATCGATGCACTCGTCCATTCATTGAAACGA
GAAGGGGCGACGCGACTGCAAGCGAAGATGGCAGGCGGCGCTCAGATGTTTCAGTTTAAATATGAGAACGAAGCGATGCG
AATCGGTGAGCGAAACGCCGAGGCGATCCGTCAAGCATTAAAAGTCCATCGTATTCCGCTCGTGGCAGAAGATTGCGGCG
GACATAACGGGCGGACGATCGAATTTGATGTCGCAACATCCGTCTTGTCGATTCGGACGGTGAGCGTGGGTACGAAAGAA
CTATAA

Upstream 100 bases:

>100_bases
GACACGACATTTATGATCGATCAAAAAGTAAGCGCAGGACATGTGTTGTTCCTACCGACACATGGGTCGCTCAAACGGAT
TCAAGAACGGTTGCTTGGCA

Downstream 100 bases:

>100_bases
GGGGGGATCGACATGACGACTCATCTTACACAGTTGTGGGATCGCTGGAATATGGACCGTGATATGGATACAGCAAACGA
ATTACTAGCACATTACGAGT

Product: CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MADVLKIGIAEWKQTTAPNRLRTAGLGSCVGVILYDTRLQLAAMAHVMLPDSTIARKNQTIEVGKYADTAIDALVHSLKR
EGATRLQAKMAGGAQMFQFKYENEAMRIGERNAEAIRQALKVHRIPLVAEDCGGHNGRTIEFDVATSVLSIRTVSVGTKE
L

Sequences:

>Translated_161_residues
MADVLKIGIAEWKQTTAPNRLRTAGLGSCVGVILYDTRLQLAAMAHVMLPDSTIARKNQTIEVGKYADTAIDALVHSLKR
EGATRLQAKMAGGAQMFQFKYENEAMRIGERNAEAIRQALKVHRIPLVAEDCGGHNGRTIEFDVATSVLSIRTVSVGTKE
L
>Mature_160_residues
ADVLKIGIAEWKQTTAPNRLRTAGLGSCVGVILYDTRLQLAAMAHVMLPDSTIARKNQTIEVGKYADTAIDALVHSLKRE
GATRLQAKMAGGAQMFQFKYENEAMRIGERNAEAIRQALKVHRIPLVAEDCGGHNGRTIEFDVATSVLSIRTVSVGTKEL

Specific function: Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 17550; Mature: 17418

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVLKIGIAEWKQTTAPNRLRTAGLGSCVGVILYDTRLQLAAMAHVMLPDSTIARKNQT
CCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCE
IEVGKYADTAIDALVHSLKREGATRLQAKMAGGAQMFQFKYENEAMRIGERNAEAIRQAL
EEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHH
KVHRIPLVAEDCGGHNGRTIEFDVATSVLSIRTVSVGTKEL
HHHCCCEEECCCCCCCCCEEEEEHHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
ADVLKIGIAEWKQTTAPNRLRTAGLGSCVGVILYDTRLQLAAMAHVMLPDSTIARKNQT
CCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCE
IEVGKYADTAIDALVHSLKREGATRLQAKMAGGAQMFQFKYENEAMRIGERNAEAIRQAL
EEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHH
KVHRIPLVAEDCGGHNGRTIEFDVATSVLSIRTVSVGTKEL
HHHCCCEEECCCCCCCCCEEEEEHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]