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The map label for this gene is ftsY [H]

Identifier: 229918603

GI number: 229918603

Start: 2856896

End: 2857921

Strand: Direct

Name: ftsY [H]

Synonym: EAT1b_2890

Alternate gene names: 229918603

Gene position: 2856896-2857921 (Clockwise)

Preceding gene: 229918602

Following gene: 229918604

Centisome position: 95.23

GC content: 51.36

Gene sequence:

>1026_bases
TTGAGCTTTTTCAAGAAATTAAAAGAGAAATTGACGACATCTACCCAAGAGGTGTCACAGAAGTTTACAGAGGGGTTGAC
GAAGACACGTGACGGCTTTGCAAGTGCCGTCAACGACCTCGTCTATCGCTTCCGCGAGGTGGATGAAGATTTCTTTGATG
AACTCGAAGATTTACTCATTCAAGCGGACGTCGGCGTCACGACGACGATGGACCTCGTCGAAGATTTGAAAGAAGAAGTG
AAGCGACGTAATTTGAAGGACCCGGTCGCGGTGCGTGACGCACTCGTCGAAGTGGTGGCGAACCGCCTCCAAGAGGATGA
ATCGGACCGTGAACTGAATATGCAGGACGGACTCACGGTCATCTTGTTTGTCGGCGTCAATGGTGTCGGAAAGACGACGA
CCATCGGCAAGCTGGCGCACCAGTTGAAATCTGAAGGGCGTTCCGTCATGCTCGCGGCAGGCGATACGTTCCGTGCCGGC
GCTATCGAGCAACTTCAAGTATGGGGAGAACGTGTCGGGGTACCTGTCATTCGTCAAACGGAAGGATCTGACCCGGCTGC
TGTCGTCTTTGACGCCGTTCAGGCTGCTAAGTCACGCAACATGGACGTCTTGATTTGTGATACGGCGGGACGTCTTCAAA
ATAAGGTCAATCTAATGAAAGAACTTGAAAAAGTCAAACGAGTCATTGAGCGAGAAGTACCGAACGGACCGCACGAGGTA
TTGCTCGCATTAGACGCGACGACGGGGCAAAACGCCATGGTTCAAGCGAAAGCGTTCAAAGAAGCGACGAACGTGAGCGG
AATCGTCCTCACGAAGCTCGATGGGACGGCCAAAGGCGGAATTGTCCTAGCGATTCGGAACGAACTCGATATCCCGGTCA
AGTATGTCGGCCTTGGAGAGAAGATTGACGATTTACAGGAGTTTGATCCAGAACAGTTCGTCCTTGGATTGTTCGGTGAC
GTTTTTGAAGACAAGAACGAGGAAGCTTTGACAGAAAAAGAGGACACAAACGAGGACCTCGCCTAA

Upstream 100 bases:

>100_bases
GCGTCACGATGCAACAGAACGGGGTGTCCGAGGTTTTATCGGTCGAACTGTCTGAAGCAAAACGTGTCGTTGAAATGGAT
GAAGAGATGGAGGAATCACG

Downstream 100 bases:

>100_bases
GTTTTGCTGTTAAGAAAAAAACTTGACAAGTACTAGGCACGGCTGTACTATAGGTAGTTGTAAAGGGATTTCACTTAACA
TGTGGAGGTGAAAGGTTTGA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSFFKKLKEKLTTSTQEVSQKFTEGLTKTRDGFASAVNDLVYRFREVDEDFFDELEDLLIQADVGVTTTMDLVEDLKEEV
KRRNLKDPVAVRDALVEVVANRLQEDESDRELNMQDGLTVILFVGVNGVGKTTTIGKLAHQLKSEGRSVMLAAGDTFRAG
AIEQLQVWGERVGVPVIRQTEGSDPAAVVFDAVQAAKSRNMDVLICDTAGRLQNKVNLMKELEKVKRVIEREVPNGPHEV
LLALDATTGQNAMVQAKAFKEATNVSGIVLTKLDGTAKGGIVLAIRNELDIPVKYVGLGEKIDDLQEFDPEQFVLGLFGD
VFEDKNEEALTEKEDTNEDLA

Sequences:

>Translated_341_residues
MSFFKKLKEKLTTSTQEVSQKFTEGLTKTRDGFASAVNDLVYRFREVDEDFFDELEDLLIQADVGVTTTMDLVEDLKEEV
KRRNLKDPVAVRDALVEVVANRLQEDESDRELNMQDGLTVILFVGVNGVGKTTTIGKLAHQLKSEGRSVMLAAGDTFRAG
AIEQLQVWGERVGVPVIRQTEGSDPAAVVFDAVQAAKSRNMDVLICDTAGRLQNKVNLMKELEKVKRVIEREVPNGPHEV
LLALDATTGQNAMVQAKAFKEATNVSGIVLTKLDGTAKGGIVLAIRNELDIPVKYVGLGEKIDDLQEFDPEQFVLGLFGD
VFEDKNEEALTEKEDTNEDLA
>Mature_340_residues
SFFKKLKEKLTTSTQEVSQKFTEGLTKTRDGFASAVNDLVYRFREVDEDFFDELEDLLIQADVGVTTTMDLVEDLKEEVK
RRNLKDPVAVRDALVEVVANRLQEDESDRELNMQDGLTVILFVGVNGVGKTTTIGKLAHQLKSEGRSVMLAAGDTFRAGA
IEQLQVWGERVGVPVIRQTEGSDPAAVVFDAVQAAKSRNMDVLICDTAGRLQNKVNLMKELEKVKRVIEREVPNGPHEVL
LALDATTGQNAMVQAKAFKEATNVSGIVLTKLDGTAKGGIVLAIRNELDIPVKYVGLGEKIDDLQEFDPEQFVLGLFGDV
FEDKNEEALTEKEDTNEDLA

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=277, Percent_Identity=31.7689530685921, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=36.5, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI23308697, Length=311, Percent_Identity=29.903536977492, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI295424842, Length=311, Percent_Identity=29.903536977492, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=34.5588235294118, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1789874, Length=300, Percent_Identity=51.6666666666667, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI1788963, Length=319, Percent_Identity=33.5423197492163, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=269, Percent_Identity=30.4832713754647, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=245, Percent_Identity=35.1020408163265, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=200, Percent_Identity=37.5, Blast_Score=146, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6320498, Length=248, Percent_Identity=27.8225806451613, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17647949, Length=323, Percent_Identity=29.1021671826625, Blast_Score=134, Evalue=8e-32,
Organism=Drosophila melanogaster, GI24641198, Length=222, Percent_Identity=31.981981981982, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 37660; Mature: 37529

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFKKLKEKLTTSTQEVSQKFTEGLTKTRDGFASAVNDLVYRFREVDEDFFDELEDLLI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
QADVGVTTTMDLVEDLKEEVKRRNLKDPVAVRDALVEVVANRLQEDESDRELNMQDGLTV
HCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
ILFVGVNGVGKTTTIGKLAHQLKSEGRSVMLAAGDTFRAGAIEQLQVWGERVGVPVIRQT
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECC
EGSDPAAVVFDAVQAAKSRNMDVLICDTAGRLQNKVNLMKELEKVKRVIEREVPNGPHEV
CCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHE
LLALDATTGQNAMVQAKAFKEATNVSGIVLTKLDGTAKGGIVLAIRNELDIPVKYVGLGE
EEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
KIDDLQEFDPEQFVLGLFGDVFEDKNEEALTEKEDTNEDLA
HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
SFFKKLKEKLTTSTQEVSQKFTEGLTKTRDGFASAVNDLVYRFREVDEDFFDELEDLLI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
QADVGVTTTMDLVEDLKEEVKRRNLKDPVAVRDALVEVVANRLQEDESDRELNMQDGLTV
HCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
ILFVGVNGVGKTTTIGKLAHQLKSEGRSVMLAAGDTFRAGAIEQLQVWGERVGVPVIRQT
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECC
EGSDPAAVVFDAVQAAKSRNMDVLICDTAGRLQNKVNLMKELEKVKRVIEREVPNGPHEV
CCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHE
LLALDATTGQNAMVQAKAFKEATNVSGIVLTKLDGTAKGGIVLAIRNELDIPVKYVGLGE
EEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
KIDDLQEFDPEQFVLGLFGDVFEDKNEEALTEKEDTNEDLA
HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]