Click here to switch to the map view.

The map label for this gene is 229918604

Identifier: 229918604

GI number: 229918604

Start: 2858018

End: 2858341

Strand: Direct

Name: 229918604

Synonym: EAT1b_2891

Alternate gene names: NA

Gene position: 2858018-2858341 (Clockwise)

Preceding gene: 229918603

Following gene: 229918605

Centisome position: 95.27

GC content: 46.3

Gene sequence:

>324_bases
TTGACGCTCGAAAAAACGAATCGCATGAACTATCTCATCGATTTCTATCAAGCGCTCCTCACACCGAAACAGCGCAACTA
TATGTCTCTTTATTACCTAGATGACTACTCGCTCGGAGAGATTGCGGAAGAGTTTGAAGTCAGCCGTCAAGCGGTCTACG
ATAACATAAAGCGTACAGAAACGATGCTTGAACAGTACGAGGAAAAGCTAGCCTTATTCGAAAAGTTCGAACAGCGCCAG
CAACTTCTTCAGACCCTCAAACGTCAAGTCGAGCTCACCGATGACGTGAGCGCCACGATTTCTGCGCTTGAGAATTTAGA
GTAG

Upstream 100 bases:

>100_bases
CTAAGTTTTGCTGTTAAGAAAAAAACTTGACAAGTACTAGGCACGGCTGTACTATAGGTAGTTGTAAAGGGATTTCACTT
AACATGTGGAGGTGAAAGGT

Downstream 100 bases:

>100_bases
GGGGCTGAAGCATGGCATTTGAAGGATTATCAGAACGATTGCAATCGACACTTTCAAAAATGCGCGGTAAAGGGAAAATC
TCGGAGACCGATGTCAAAGA

Product: helix-turn-helix protein YlxM/p13 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTLEKTNRMNYLIDFYQALLTPKQRNYMSLYYLDDYSLGEIAEEFEVSRQAVYDNIKRTETMLEQYEEKLALFEKFEQRQ
QLLQTLKRQVELTDDVSATISALENLE

Sequences:

>Translated_107_residues
MTLEKTNRMNYLIDFYQALLTPKQRNYMSLYYLDDYSLGEIAEEFEVSRQAVYDNIKRTETMLEQYEEKLALFEKFEQRQ
QLLQTLKRQVELTDDVSATISALENLE
>Mature_106_residues
TLEKTNRMNYLIDFYQALLTPKQRNYMSLYYLDDYSLGEIAEEFEVSRQAVYDNIKRTETMLEQYEEKLALFEKFEQRQQ
LLQTLKRQVELTDDVSATISALENLE

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2891_EXISA (C4L5Z9)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002887250.1
- GeneID:   7870146
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_2891
- OMA:   KSYMSLY
- ProtClustDB:   CLSK2489523
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 12850; Mature: 12718

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEKTNRMNYLIDFYQALLTPKQRNYMSLYYLDDYSLGEIAEEFEVSRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TMLEQYEEKLALFEKFEQRQQLLQTLKRQVELTDDVSATISALENLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLEKTNRMNYLIDFYQALLTPKQRNYMSLYYLDDYSLGEIAEEFEVSRQAVYDNIKRTE
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TMLEQYEEKLALFEKFEQRQQLLQTLKRQVELTDDVSATISALENLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA