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The map label for this gene is rsgA [H]

Identifier: 229918585

GI number: 229918585

Start: 2839443

End: 2840327

Strand: Direct

Name: rsgA [H]

Synonym: EAT1b_2872

Alternate gene names: 229918585

Gene position: 2839443-2840327 (Clockwise)

Preceding gene: 229918584

Following gene: 229918586

Centisome position: 94.65

GC content: 48.36

Gene sequence:

>885_bases
TTGAAAGGAACGATTATTCGCTTACAAGGCGGGTTTTATGATGTGATGACCGAGTCGAATCAAGAGATTCGGTGTCGGGC
GAGAGGGAATTTTCGGAAACGAAACATCTCGCCTGTCGTCGGGGATGACGTGGTCATTCAAGATCAGGAAGATGGGACGG
GCTATATTTTAGAGGTGGAGGAGCGTCAAAACCATCTCGTCCGCCCACCAATCGCCAACATCGATCAGGCATTTCTACTT
TTTTCTGTGAAAGAACCGGCGTTTTCTTATCATTTGCTTGACCGATTCCTCGTATTGATCGAATCCAAACAAATTCATCC
AATTATCGTGTTAACAAAGATGGACCTGCTCAGTGAAGAAGAGACCGGACCGATTCAAGAGGCGGTCGCCCGCTATCGTG
ACATCGGATATGACGTGATTGAGACGTCGACGGAGCTTTCGGATGGGGTCGATCAAGTACGGGGACTCTTCAAAGAGAAG
ACGAGCGTGTTTGCCGGTCAAACAGGTGTCGGGAAGAGTTCGCTTTTAAACGCAGTCGCGCCTGAACTCGAATTGGCAAC
GGGGAAAATCTCAAAATCACTCGGTCGTGGGAAACATACGACGCGTCACGTCACGCTCATTAAATTGGCCGACGGGCTTG
TGGCGGATACGCCAGGATTTTCTAGTCTCGAGTTTCCTCAAGAACTCGAGGCGGATGAACTAAGATGGTGCTTCCCAGAA
TTTGTGGAACGTCACGACGATTGCAAGTTCCGGGGATGCGTCCATATCAATGAACCGGGCTGTGCCATTAAACAAGCCGT
AGAAGATGGCAAAATTGCTTCAACTCGTTATGAGAATTATGTTACCTTTATGGAGGAGTTAAACGATCGTAAACGGAGGT
ATTGA

Upstream 100 bases:

>100_bases
TGAGATCGTCCGAACGGATTCAGTCACATATGCACAGGCCAAAGAGGCACAATAAAGAGGTGACGGTGTCGTCACCTCTT
TTTTAAGGGAGGTAGTCATA

Downstream 100 bases:

>100_bases
CAGATGATTAAAATCGCACCATCAATTTTAGCAGCCGACTTTGCCAATTTGGAGGCTGAAGTGAAAGCCGTTCAAGATGC
GGGGGCGGATTATATCCATT

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKGTIIRLQGGFYDVMTESNQEIRCRARGNFRKRNISPVVGDDVVIQDQEDGTGYILEVEERQNHLVRPPIANIDQAFLL
FSVKEPAFSYHLLDRFLVLIESKQIHPIIVLTKMDLLSEEETGPIQEAVARYRDIGYDVIETSTELSDGVDQVRGLFKEK
TSVFAGQTGVGKSSLLNAVAPELELATGKISKSLGRGKHTTRHVTLIKLADGLVADTPGFSSLEFPQELEADELRWCFPE
FVERHDDCKFRGCVHINEPGCAIKQAVEDGKIASTRYENYVTFMEELNDRKRRY

Sequences:

>Translated_294_residues
MKGTIIRLQGGFYDVMTESNQEIRCRARGNFRKRNISPVVGDDVVIQDQEDGTGYILEVEERQNHLVRPPIANIDQAFLL
FSVKEPAFSYHLLDRFLVLIESKQIHPIIVLTKMDLLSEEETGPIQEAVARYRDIGYDVIETSTELSDGVDQVRGLFKEK
TSVFAGQTGVGKSSLLNAVAPELELATGKISKSLGRGKHTTRHVTLIKLADGLVADTPGFSSLEFPQELEADELRWCFPE
FVERHDDCKFRGCVHINEPGCAIKQAVEDGKIASTRYENYVTFMEELNDRKRRY
>Mature_294_residues
MKGTIIRLQGGFYDVMTESNQEIRCRARGNFRKRNISPVVGDDVVIQDQEDGTGYILEVEERQNHLVRPPIANIDQAFLL
FSVKEPAFSYHLLDRFLVLIESKQIHPIIVLTKMDLLSEEETGPIQEAVARYRDIGYDVIETSTELSDGVDQVRGLFKEK
TSVFAGQTGVGKSSLLNAVAPELELATGKISKSLGRGKHTTRHVTLIKLADGLVADTPGFSSLEFPQELEADELRWCFPE
FVERHDDCKFRGCVHINEPGCAIKQAVEDGKIASTRYENYVTFMEELNDRKRRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=308, Percent_Identity=38.6363636363636, Blast_Score=174, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33225; Mature: 33225

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTIIRLQGGFYDVMTESNQEIRCRARGNFRKRNISPVVGDDVVIQDQEDGTGYILEVE
CCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEE
ERQNHLVRPPIANIDQAFLLFSVKEPAFSYHLLDRFLVLIESKQIHPIIVLTKMDLLSEE
CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCC
ETGPIQEAVARYRDIGYDVIETSTELSDGVDQVRGLFKEKTSVFAGQTGVGKSSLLNAVA
CCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELATGKISKSLGRGKHTTRHVTLIKLADGLVADTPGFSSLEFPQELEADELRWCFPE
CCHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCEECCCCCCCCCCCHHCCHHHHHHHHHH
FVERHDDCKFRGCVHINEPGCAIKQAVEDGKIASTRYENYVTFMEELNDRKRRY
HHHCCCCCCEECEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGTIIRLQGGFYDVMTESNQEIRCRARGNFRKRNISPVVGDDVVIQDQEDGTGYILEVE
CCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEE
ERQNHLVRPPIANIDQAFLLFSVKEPAFSYHLLDRFLVLIESKQIHPIIVLTKMDLLSEE
CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCC
ETGPIQEAVARYRDIGYDVIETSTELSDGVDQVRGLFKEKTSVFAGQTGVGKSSLLNAVA
CCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELATGKISKSLGRGKHTTRHVTLIKLADGLVADTPGFSSLEFPQELEADELRWCFPE
CCHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCEECCCCCCCCCCCHHCCHHHHHHHHHH
FVERHDDCKFRGCVHINEPGCAIKQAVEDGKIASTRYENYVTFMEELNDRKRRY
HHHCCCCCCEECEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA