| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ctaE [H]
Identifier: 229918524
GI number: 229918524
Start: 2780329
End: 2780955
Strand: Direct
Name: ctaE [H]
Synonym: EAT1b_2811
Alternate gene names: 229918524
Gene position: 2780329-2780955 (Clockwise)
Preceding gene: 229918523
Following gene: 229918525
Centisome position: 92.68
GC content: 47.05
Gene sequence:
>627_bases ATGGCACATGCAGTTGAAAAACACCCAGTGACCGGTATCCCGGCCAATCCAGAGAAAGCAACACTGGAAGGGAAAAATAA ATATGTGGCCTTCTGGTTCTTCCTTGGTGGAGAGACAGTCCTCTTCGCCTCGCTCTTTGGAACATACGTTGGTCTCTTGA ACTCTGGTGCGCCAGAGGAATTACGTTCGTATAACATTTTCGAAATGGAGCTCGTCTTCATCATGACGATGCTCCTCCTC ACAAGTTCACTTACAAGTGTCCTTGCGATGATGAACATGAAGGCAAACAATCCAGGGCGTATGAAGCTTTGGTTGATTGT CACGCTCCTTCTTGGTGCCGGCTTCCTTGGTGCTGAGATTTACGAGTTCATTCACTACTACCACATCGGTCACACGTTCA CGTCGAGCGCATTCGGTTCAGCCTTCTATACGTTAGTTGGTTTCCACGGTGCGCACGTAACGTTCGGTCTCCTTTGGATT ACGACACTCTTGATTCGTAACTGGAACCGTCCGATCGATGTATACAATGCACCAAAGTTCTATGTATCGAGTCTATATTG GCACTTTATCGACGTTGTTTGGGTCTTCATCTTCTCAATCGTCTACCTCTTAGGGATGGTGAACTAA
Upstream 100 bases:
>100_bases GATGTTCCTACGTTCTTGGATTGACGATCACGGCTACTACATTCCGAAGTCACAAGTCGAAGCAGACTTGAAAGCGATTC GTGAGAAAGGAGAACAATAA
Downstream 100 bases:
>100_bases TATGGAAAAACGAGTAATGAACGAATCTCACAAGCAGTTAGAGCTTGAAGTAAAAGCAGAGTCGAAACGTGAGTATCAGC TTCAATTGATCAGTTTCGCA
Product: Cytochrome-c oxidase
Products: NA
Alternate protein names: Caa-3605 subunit 3; Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAHAVEKHPVTGIPANPEKATLEGKNKYVAFWFFLGGETVLFASLFGTYVGLLNSGAPEELRSYNIFEMELVFIMTMLLL TSSLTSVLAMMNMKANNPGRMKLWLIVTLLLGAGFLGAEIYEFIHYYHIGHTFTSSAFGSAFYTLVGFHGAHVTFGLLWI TTLLIRNWNRPIDVYNAPKFYVSSLYWHFIDVVWVFIFSIVYLLGMVN
Sequences:
>Translated_208_residues MAHAVEKHPVTGIPANPEKATLEGKNKYVAFWFFLGGETVLFASLFGTYVGLLNSGAPEELRSYNIFEMELVFIMTMLLL TSSLTSVLAMMNMKANNPGRMKLWLIVTLLLGAGFLGAEIYEFIHYYHIGHTFTSSAFGSAFYTLVGFHGAHVTFGLLWI TTLLIRNWNRPIDVYNAPKFYVSSLYWHFIDVVWVFIFSIVYLLGMVN >Mature_207_residues AHAVEKHPVTGIPANPEKATLEGKNKYVAFWFFLGGETVLFASLFGTYVGLLNSGAPEELRSYNIFEMELVFIMTMLLLT SSLTSVLAMMNMKANNPGRMKLWLIVTLLLGAGFLGAEIYEFIHYYHIGHTFTSSAFGSAFYTLVGFHGAHVTFGLLWIT TLLIRNWNRPIDVYNAPKFYVSSLYWHFIDVVWVFIFSIVYLLGMVN
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=137, Percent_Identity=31.3868613138686, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786633, Length=184, Percent_Identity=42.9347826086957, Blast_Score=140, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 23544; Mature: 23413
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAVEKHPVTGIPANPEKATLEGKNKYVAFWFFLGGETVLFASLFGTYVGLLNSGAPEE CCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH LRSYNIFEMELVFIMTMLLLTSSLTSVLAMMNMKANNPGRMKLWLIVTLLLGAGFLGAEI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH YEFIHYYHIGHTFTSSAFGSAFYTLVGFHGAHVTFGLLWITTLLIRNWNRPIDVYNAPKF HHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH YVSSLYWHFIDVVWVFIFSIVYLLGMVN HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHAVEKHPVTGIPANPEKATLEGKNKYVAFWFFLGGETVLFASLFGTYVGLLNSGAPEE CCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH LRSYNIFEMELVFIMTMLLLTSSLTSVLAMMNMKANNPGRMKLWLIVTLLLGAGFLGAEI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH YEFIHYYHIGHTFTSSAFGSAFYTLVGFHGAHVTFGLLWITTLLIRNWNRPIDVYNAPKF HHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH YVSSLYWHFIDVVWVFIFSIVYLLGMVN HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1847686; 9384377 [H]