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The map label for this gene is ctaF [H]

Identifier: 229918525

GI number: 229918525

Start: 2780972

End: 2781286

Strand: Direct

Name: ctaF [H]

Synonym: EAT1b_2812

Alternate gene names: 229918525

Gene position: 2780972-2781286 (Clockwise)

Preceding gene: 229918524

Following gene: 229918526

Centisome position: 92.7

GC content: 45.4

Gene sequence:

>315_bases
ATGAACGAATCTCACAAGCAGTTAGAGCTTGAAGTAAAAGCAGAGTCGAAACGTGAGTATCAGCTTCAATTGATCAGTTT
CGCAATGATGATTTTACTCACATTCGTGGCATTCGGCGCCGTCTATGCGGAATTGATGCCAGTGTGGGCAGCAGGTGGTT
TCTTAATCATCTTGGCGGTCATCCAAGTCTTCCTACAGTTATATATCTTCATGCATATGAATAACCGTGGGAACACGTGG
ATCGTTGGTATGATGTGGCTAGGCATCTTTGTCGCCATCATCACGGTCGCTGCACTCCGCTTACTCATTTGGTAA

Upstream 100 bases:

>100_bases
GTATCGAGTCTATATTGGCACTTTATCGACGTTGTTTGGGTCTTCATCTTCTCAATCGTCTACCTCTTAGGGATGGTGAA
CTAATATGGAAAAACGAGTA

Downstream 100 bases:

>100_bases
TTGTGACAAAGGATTGAACATCTGTGGAAACACGGATGATTCGGTCCTTTTTCCTTTACTTCAAAAATGAATGAATAGTA
ATCTTGAAGTGAACGGTTTC

Product: cytochrome C oxidase subunit IV

Products: NA

Alternate protein names: Caa-3605 subunit 4B; Cytochrome aa3 subunit 4B; Cytochrome c oxidase polypeptide IVB [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNESHKQLELEVKAESKREYQLQLISFAMMILLTFVAFGAVYAELMPVWAAGGFLIILAVIQVFLQLYIFMHMNNRGNTW
IVGMMWLGIFVAIITVAALRLLIW

Sequences:

>Translated_104_residues
MNESHKQLELEVKAESKREYQLQLISFAMMILLTFVAFGAVYAELMPVWAAGGFLIILAVIQVFLQLYIFMHMNNRGNTW
IVGMMWLGIFVAIITVAALRLLIW
>Mature_104_residues
MNESHKQLELEVKAESKREYQLQLISFAMMILLTFVAFGAVYAELMPVWAAGGFLIILAVIQVFLQLYIFMHMNNRGNTW
IVGMMWLGIFVAIITVAALRLLIW

Specific function: Unknown

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014257
- InterPro:   IPR005171 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 11952; Mature: 11952

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESHKQLELEVKAESKREYQLQLISFAMMILLTFVAFGAVYAELMPVWAAGGFLIILAV
CCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IQVFLQLYIFMHMNNRGNTWIVGMMWLGIFVAIITVAALRLLIW
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNESHKQLELEVKAESKREYQLQLISFAMMILLTFVAFGAVYAELMPVWAAGGFLIILAV
CCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IQVFLQLYIFMHMNNRGNTWIVGMMWLGIFVAIITVAALRLLIW
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]