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The map label for this gene is dppE [H]

Identifier: 229918446

GI number: 229918446

Start: 2703177

End: 2704709

Strand: Direct

Name: dppE [H]

Synonym: EAT1b_2733

Alternate gene names: 229918446

Gene position: 2703177-2704709 (Clockwise)

Preceding gene: 229918445

Following gene: 229918447

Centisome position: 90.11

GC content: 45.66

Gene sequence:

>1533_bases
ATGAAAAAGAAATCATTCATCGTGGCCGCCTTGTTAGGTTCAGTCCTTATCCTTTTTTTATTTGTTTGGAACGAACAACG
AGAGCAGTCACGCGAACTAGTGCCAGTCGAAGAACAACAATTGACGATTTACGGGGAGTCGCTTCCGACTCAGCCGGATG
TCATGCTAGCAATTGATCCATCATCTCAAACGATCCTATCCCATCTATATGAAGGACTGTATCGATTCGGAGCAGACGGG
TCCATCGAACCGGCGCTCGTCGAGAAGTTAGAGCGATCCGAAGATGGGACGGTCTATACATTCACATTAAAAGAGAGTGT
GACGACAGAAGGAAATGCGATTGACGCGCAAACGTTCGTCGATCACTTCCAAAAACTCGTGGACGTTGATACGAATTCAC
CGTTCAGCTTCTTACTCGCAGATGTTCAATCTGCAAAAGAAATCGGGCTTGGTCAACAAGAACCGGATACGCTAGGGGTC
AAGGCAATCGATGACCGGACGCTCGAGCTGACTCTAGTCCGTCCGATGGAAGGGTTCGAACAAATTTTAGCGATGCCCGC
ATTTTTACCTCAACCAAAGGTGAAAGAATGGGATGAGCTAGAGACAAACGGTCCATTTAAAATCAAGGCAATCGAAGATA
CGACCATCTCGTTACATAAAAATGAAACGTACCGAGAAGCTGAACAGGTCACACTCGAAACGATTACCATCAAGAGTGAA
CCGAACTTGTCAGAAGCGACAGGGATGCAACCCGTCCCTTACGATTTTGACGTCTCCACGATTGATCAAGAAGGATTGAC
TGTACGGGACGTTCCACGGAGCGGAGTCTTTTATTTGAAGCCGAATGTTGAAAAAGCGCCGTTTAATGATGTAGCGTTTC
GACAAGCCATCGCATTGACGCTTGATCGGACGGAAATCGAAGATTCACTCGCACGAGCAGAACAGACGACAGAACGATTA
CTCGTCATCGACCAAAAAGCTGCGATTGCACAATTGGAAGGAAACGCCGACCAATTGTTTGACACCGTGAAGAAACGTCT
GAAGAAAGATGAAATCGAAATCGAGTTGCTCAGCTTTGTCGATGATGAAGCGCGTCAAATCTCCACAAAATTAAAGAAGA
ATTTGGAACAGTTGGATGGTTTGACCGTTAACGTCATCGAACTCCCCCTAGGAGAAAAAGTTAGGAAAGAAGTCTCAGGG
GATTATGCATTTTCATTATCAGGCTGGCAACCGGACTATCCGATGTTATCCGCCTATTTGACTCAATTTGAAACAAACGA
TGTCCTCAATTCGAGTCGATATGCCAGCGAATCGTATGATCAATTGATGGATCAGGCTCGCTCAACGGATCGGTTGGAAG
AACGAAATGAAATCTTCCGAGAAGCGGAGGCACAGCTGTTAGAAGAGGCTGTTGTTATGCCAATCTATCAAGCTGGACGC
TCTTATGTGATCGAAAAAGGTTACGACCATATCGGATATCCGGTCACCGGTCCTTCATATGTCCTAACCTTTGCAAAAAA
ATACGAAAATTGA

Upstream 100 bases:

>100_bases
TGCGACACTCGCATTTGCAAAAGTGACGAACTGACGGTAGAAAAATCATTCAAAAAAGGTTAGGGTATAAGGGTTGGTCT
AACAGAAAGGAGTGCAACGA

Downstream 100 bases:

>100_bases
GCTAAAAGCCCGCCACTGTAGGCGGGCTTTTTGACTATGGATAAAATTTTTTAGAAAAATCAAAATAAACACTTTGCAAA
ATTATCAGAATATTGTATTA

Product: extracellular solute-binding protein family 5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKKKSFIVAALLGSVLILFLFVWNEQREQSRELVPVEEQQLTIYGESLPTQPDVMLAIDPSSQTILSHLYEGLYRFGADG
SIEPALVEKLERSEDGTVYTFTLKESVTTEGNAIDAQTFVDHFQKLVDVDTNSPFSFLLADVQSAKEIGLGQQEPDTLGV
KAIDDRTLELTLVRPMEGFEQILAMPAFLPQPKVKEWDELETNGPFKIKAIEDTTISLHKNETYREAEQVTLETITIKSE
PNLSEATGMQPVPYDFDVSTIDQEGLTVRDVPRSGVFYLKPNVEKAPFNDVAFRQAIALTLDRTEIEDSLARAEQTTERL
LVIDQKAAIAQLEGNADQLFDTVKKRLKKDEIEIELLSFVDDEARQISTKLKKNLEQLDGLTVNVIELPLGEKVRKEVSG
DYAFSLSGWQPDYPMLSAYLTQFETNDVLNSSRYASESYDQLMDQARSTDRLEERNEIFREAEAQLLEEAVVMPIYQAGR
SYVIEKGYDHIGYPVTGPSYVLTFAKKYEN

Sequences:

>Translated_510_residues
MKKKSFIVAALLGSVLILFLFVWNEQREQSRELVPVEEQQLTIYGESLPTQPDVMLAIDPSSQTILSHLYEGLYRFGADG
SIEPALVEKLERSEDGTVYTFTLKESVTTEGNAIDAQTFVDHFQKLVDVDTNSPFSFLLADVQSAKEIGLGQQEPDTLGV
KAIDDRTLELTLVRPMEGFEQILAMPAFLPQPKVKEWDELETNGPFKIKAIEDTTISLHKNETYREAEQVTLETITIKSE
PNLSEATGMQPVPYDFDVSTIDQEGLTVRDVPRSGVFYLKPNVEKAPFNDVAFRQAIALTLDRTEIEDSLARAEQTTERL
LVIDQKAAIAQLEGNADQLFDTVKKRLKKDEIEIELLSFVDDEARQISTKLKKNLEQLDGLTVNVIELPLGEKVRKEVSG
DYAFSLSGWQPDYPMLSAYLTQFETNDVLNSSRYASESYDQLMDQARSTDRLEERNEIFREAEAQLLEEAVVMPIYQAGR
SYVIEKGYDHIGYPVTGPSYVLTFAKKYEN
>Mature_510_residues
MKKKSFIVAALLGSVLILFLFVWNEQREQSRELVPVEEQQLTIYGESLPTQPDVMLAIDPSSQTILSHLYEGLYRFGADG
SIEPALVEKLERSEDGTVYTFTLKESVTTEGNAIDAQTFVDHFQKLVDVDTNSPFSFLLADVQSAKEIGLGQQEPDTLGV
KAIDDRTLELTLVRPMEGFEQILAMPAFLPQPKVKEWDELETNGPFKIKAIEDTTISLHKNETYREAEQVTLETITIKSE
PNLSEATGMQPVPYDFDVSTIDQEGLTVRDVPRSGVFYLKPNVEKAPFNDVAFRQAIALTLDRTEIEDSLARAEQTTERL
LVIDQKAAIAQLEGNADQLFDTVKKRLKKDEIEIELLSFVDDEARQISTKLKKNLEQLDGLTVNVIELPLGEKVRKEVSG
DYAFSLSGWQPDYPMLSAYLTQFETNDVLNSSRYASESYDQLMDQARSTDRLEERNEIFREAEAQLLEEAVVMPIYQAGR
SYVIEKGYDHIGYPVTGPSYVLTFAKKYEN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=476, Percent_Identity=26.4705882352941, Blast_Score=145, Evalue=8e-36,
Organism=Escherichia coli, GI87081878, Length=499, Percent_Identity=25.0501002004008, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787495, Length=453, Percent_Identity=25.60706401766, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI1789966, Length=485, Percent_Identity=21.8556701030928, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57618; Mature: 57618

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSFIVAALLGSVLILFLFVWNEQREQSRELVPVEEQQLTIYGESLPTQPDVMLAIDP
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECC
SSQTILSHLYEGLYRFGADGSIEPALVEKLERSEDGTVYTFTLKESVTTEGNAIDAQTFV
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHH
DHFQKLVDVDTNSPFSFLLADVQSAKEIGLGQQEPDTLGVKAIDDRTLELTLVRPMEGFE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCHHHHH
QILAMPAFLPQPKVKEWDELETNGPFKIKAIEDTTISLHKNETYREAEQVTLETITIKSE
HHHHHHHCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEECCCHHHHHHHEEEEEEEEECC
PNLSEATGMQPVPYDFDVSTIDQEGLTVRDVPRSGVFYLKPNVEKAPFNDVAFRQAIALT
CCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHE
LDRTEIEDSLARAEQTTERLLVIDQKAAIAQLEGNADQLFDTVKKRLKKDEIEIELLSFV
ECHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
DDEARQISTKLKKNLEQLDGLTVNVIELPLGEKVRKEVSGDYAFSLSGWQPDYPMLSAYL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHH
TQFETNDVLNSSRYASESYDQLMDQARSTDRLEERNEIFREAEAQLLEEAVVMPIYQAGR
HHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SYVIEKGYDHIGYPVTGPSYVLTFAKKYEN
CEEEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKSFIVAALLGSVLILFLFVWNEQREQSRELVPVEEQQLTIYGESLPTQPDVMLAIDP
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECC
SSQTILSHLYEGLYRFGADGSIEPALVEKLERSEDGTVYTFTLKESVTTEGNAIDAQTFV
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHH
DHFQKLVDVDTNSPFSFLLADVQSAKEIGLGQQEPDTLGVKAIDDRTLELTLVRPMEGFE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCHHHHH
QILAMPAFLPQPKVKEWDELETNGPFKIKAIEDTTISLHKNETYREAEQVTLETITIKSE
HHHHHHHCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEECCCHHHHHHHEEEEEEEEECC
PNLSEATGMQPVPYDFDVSTIDQEGLTVRDVPRSGVFYLKPNVEKAPFNDVAFRQAIALT
CCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHE
LDRTEIEDSLARAEQTTERLLVIDQKAAIAQLEGNADQLFDTVKKRLKKDEIEIELLSFV
ECHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
DDEARQISTKLKKNLEQLDGLTVNVIELPLGEKVRKEVSGDYAFSLSGWQPDYPMLSAYL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHH
TQFETNDVLNSSRYASESYDQLMDQARSTDRLEERNEIFREAEAQLLEEAVVMPIYQAGR
HHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SYVIEKGYDHIGYPVTGPSYVLTFAKKYEN
CEEEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]