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The map label for this gene is udk [H]

Identifier: 229918441

GI number: 229918441

Start: 2698904

End: 2699539

Strand: Direct

Name: udk [H]

Synonym: EAT1b_2728

Alternate gene names: 229918441

Gene position: 2698904-2699539 (Clockwise)

Preceding gene: 229918440

Following gene: 229918442

Centisome position: 89.97

GC content: 50.31

Gene sequence:

>636_bases
ATGCAACATAAACCCGTCATTATTGGCGTGGCCGGGGGTACCGGATCAGGAAAAACGACCGTGGCCCGCGCGCTCGTCGA
TGCGTTTCAAGGTCAATCGGTCGTCATGATCGAGCAAGACGCGTACTATAAGGATCAATCAGAGATGACCATGGAGGAGC
GGTACAAGACGAACTACGACCACCCCTTCGCCTTTGATAACGATTTGTTGATTGAACATATCCAACAGTTACAACAACAT
CAGGCGATTGAAAAGCCGGTCTATGACTATGCGGCCCACACGCGTTCAAGTGAAACCATCTTAATCGAACCCGTCGATGT
CGTCATCGTCGAAGGGATCTTGGCACTCGAAGATGCGCGTTTACGAGATCTGATGGATATCAAAGTGTTCGTGGATACAG
ATGCGGACGTTAGAATCTTGCGTCGCATGCAGCGTGATTTGAATGAACGTGGACGTTCAATCGACTCGGTCGTGGCGCAG
TACACGAATGTCGTCCGCCCGATGCATTTGCAGTTCTGTGAACCGACGAAGCGTTATGCAGACATCATCGTTCCTGAAGG
CGGAGAAAACTTTGTTGCAATCGATTTACTCGTGACAAAAATCCGTTGGGTGCTCACTGAGCGCAATCGCGCTTGA

Upstream 100 bases:

>100_bases
GAGCAATTGATGGCACGGACCGATTATCATACTGCAATTTTGCCCCTTGGTGATGGCCTAGCAATCAGTCGTAAATTACG
ATGAGGAGGACTTAACTTTG

Downstream 100 bases:

>100_bases
GGAAATAAATCGTTTTCAATTCAACCCTAGCTGTAATATACTAGGAGACAATGAAGGAGTGACAGAAATGGCTGAAAAAC
AACACTATATGACGTTAGAC

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQHKPVIIGVAGGTGSGKTTVARALVDAFQGQSVVMIEQDAYYKDQSEMTMEERYKTNYDHPFAFDNDLLIEHIQQLQQH
QAIEKPVYDYAAHTRSSETILIEPVDVVIVEGILALEDARLRDLMDIKVFVDTDADVRILRRMQRDLNERGRSIDSVVAQ
YTNVVRPMHLQFCEPTKRYADIIVPEGGENFVAIDLLVTKIRWVLTERNRA

Sequences:

>Translated_211_residues
MQHKPVIIGVAGGTGSGKTTVARALVDAFQGQSVVMIEQDAYYKDQSEMTMEERYKTNYDHPFAFDNDLLIEHIQQLQQH
QAIEKPVYDYAAHTRSSETILIEPVDVVIVEGILALEDARLRDLMDIKVFVDTDADVRILRRMQRDLNERGRSIDSVVAQ
YTNVVRPMHLQFCEPTKRYADIIVPEGGENFVAIDLLVTKIRWVLTERNRA
>Mature_211_residues
MQHKPVIIGVAGGTGSGKTTVARALVDAFQGQSVVMIEQDAYYKDQSEMTMEERYKTNYDHPFAFDNDLLIEHIQQLQQH
QAIEKPVYDYAAHTRSSETILIEPVDVVIVEGILALEDARLRDLMDIKVFVDTDADVRILRRMQRDLNERGRSIDSVVAQ
YTNVVRPMHLQFCEPTKRYADIIVPEGGENFVAIDLLVTKIRWVLTERNRA

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI18699734, Length=215, Percent_Identity=41.3953488372093, Blast_Score=194, Evalue=6e-50,
Organism=Homo sapiens, GI301129207, Length=203, Percent_Identity=43.8423645320197, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI57863312, Length=203, Percent_Identity=43.8423645320197, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI13899253, Length=217, Percent_Identity=41.0138248847926, Blast_Score=178, Evalue=3e-45,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=40.1315789473684, Blast_Score=118, Evalue=3e-27,
Organism=Escherichia coli, GI87082034, Length=203, Percent_Identity=55.6650246305419, Blast_Score=238, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17539894, Length=209, Percent_Identity=43.5406698564593, Blast_Score=182, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17539892, Length=209, Percent_Identity=43.5406698564593, Blast_Score=182, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71981181, Length=208, Percent_Identity=34.6153846153846, Blast_Score=144, Evalue=5e-35,
Organism=Saccharomyces cerevisiae, GI6324339, Length=188, Percent_Identity=35.6382978723404, Blast_Score=125, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6320223, Length=210, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221458995, Length=220, Percent_Identity=43.6363636363636, Blast_Score=187, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24649624, Length=221, Percent_Identity=42.9864253393665, Blast_Score=184, Evalue=3e-47,
Organism=Drosophila melanogaster, GI28573516, Length=210, Percent_Identity=40, Blast_Score=176, Evalue=9e-45,
Organism=Drosophila melanogaster, GI28573514, Length=210, Percent_Identity=40, Blast_Score=176, Evalue=9e-45,
Organism=Drosophila melanogaster, GI28573512, Length=210, Percent_Identity=40, Blast_Score=176, Evalue=9e-45,
Organism=Drosophila melanogaster, GI45550449, Length=210, Percent_Identity=40, Blast_Score=176, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24133; Mature: 24133

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHKPVIIGVAGGTGSGKTTVARALVDAFQGQSVVMIEQDAYYKDQSEMTMEERYKTNYD
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCC
HPFAFDNDLLIEHIQQLQQHQAIEKPVYDYAAHTRSSETILIEPVDVVIVEGILALEDAR
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH
LRDLMDIKVFVDTDADVRILRRMQRDLNERGRSIDSVVAQYTNVVRPMHLQFCEPTKRYA
HHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHH
DIIVPEGGENFVAIDLLVTKIRWVLTERNRA
EEEEECCCCCEEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQHKPVIIGVAGGTGSGKTTVARALVDAFQGQSVVMIEQDAYYKDQSEMTMEERYKTNYD
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCC
HPFAFDNDLLIEHIQQLQQHQAIEKPVYDYAAHTRSSETILIEPVDVVIVEGILALEDAR
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH
LRDLMDIKVFVDTDADVRILRRMQRDLNERGRSIDSVVAQYTNVVRPMHLQFCEPTKRYA
HHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHH
DIIVPEGGENFVAIDLLVTKIRWVLTERNRA
EEEEECCCCCEEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]