Click here to switch to the map view.

The map label for this gene is yshE [H]

Identifier: 229918291

GI number: 229918291

Start: 2534805

End: 2535215

Strand: Direct

Name: yshE [H]

Synonym: EAT1b_2574

Alternate gene names: 229918291

Gene position: 2534805-2535215 (Clockwise)

Preceding gene: 229918290

Following gene: 229918292

Centisome position: 84.5

GC content: 52.31

Gene sequence:

>411_bases
ATGGGTACGATTACGTTTGCCGTTATGCTGGAGTCGTTCGGCCTCTATTCGATGGCGGGACTGATGATTGTCGTCGGTCT
TGCCATCTTCGAGGTGACGACGCCGTACAGCAACTGGCGTGAGATTCAAAAAGGAAATATCGCCGTCGCCTTGGCGACAG
GCGGGAAGATTGTCGGTCTCGCCAACATCTTCCGGGTCGTCGAGAGCCATCATGATAGCACAATCGACATCTTTGTCGGT
GGAGGATTTGGATTCATTTTGCTCCTCGCGACATACTGGTTGTTTGAATTTTTGACACCGACATTGAAGGTGAACGACGA
GATTCAAAAAGGAAATATCGCCGTCGGGTTGTTGGCATTCTTGCTGTCGATCGGGGTCTCCCTCGTCGTCGGCGCGGCAT
TGGTGAGGTGA

Upstream 100 bases:

>100_bases
TTTAAAAGGACATCGTCACGTGAAGAGCCAGCGCCCAGGAGGAATGGGTGAAGGTGGACTCGGTGTCACGGTCGTCGAAC
TGAAGTAAGGGGAGTCGGGA

Downstream 100 bases:

>100_bases
AGACATGGTATACGAACGATTGGCAAAGATTTTGTTCATCGGGGCCGGGCTGTTCTTAGTGGCAGCGGCACTATGGTATA
TCTTTTATTGAGAGAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MGTITFAVMLESFGLYSMAGLMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGLANIFRVVESHHDSTIDIFVG
GGFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAFLLSIGVSLVVGAALVR

Sequences:

>Translated_136_residues
MGTITFAVMLESFGLYSMAGLMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGLANIFRVVESHHDSTIDIFVG
GGFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAFLLSIGVSLVVGAALVR
>Mature_135_residues
GTITFAVMLESFGLYSMAGLMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGLANIFRVVESHHDSTIDIFVGG
GFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAFLLSIGVSLVVGAALVR

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 14553; Mature: 14422

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTITFAVMLESFGLYSMAGLMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHH
ANIFRVVESHHDSTIDIFVGGGFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAF
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
LLSIGVSLVVGAALVR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTITFAVMLESFGLYSMAGLMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHH
ANIFRVVESHHDSTIDIFVGGGFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAF
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
LLSIGVSLVVGAALVR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]