| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918292
Identifier: 229918292
GI number: 229918292
Start: 2535427
End: 2537694
Strand: Direct
Name: 229918292
Synonym: EAT1b_2575
Alternate gene names: NA
Gene position: 2535427-2537694 (Clockwise)
Preceding gene: 229918291
Following gene: 229918295
Centisome position: 84.52
GC content: 27.69
Gene sequence:
>2268_bases ATGAAGAAAATAGTAGTTGATTTTGAAAATTGTTTTGGCATTAAAAAATTGAAGCATGAGTTTAAATTTGAAAGTAATAA AGTAAACTCTGTTTATGCAAAAAATGGAGTTATGAAGACTTCTTTTACAAAAGTATTTGATTGCATTAAAAATTCAAAAA CAATTCAGATTAAAGATCAAATTTTTGGAGAAAGTCCAATCAAATTTGATGTTTATTTAGATGATAATTTAATTAAAGAT GATGAAATTTTTGTTATTCATTCATATCGAGATAAATATGAGACTAGTAACTTGGGGGATTTACTAATTGATACTGAACT TAAGGAAGAAGTATCAAAATTATTAATTAAAAGAAATGAATTACTCAAAAAAATTGAAAACTTGTCAGGGATTAAAGTTT CAAGAACTACCGGTGGAAAAGTTAGGTTTGAACTTGAACCAAAAATTATAAAAGATATGGTTTTTCATGAAGATAGTATA CTAATGAATTTGAATTATTTTATTGAAAAAGATGAATTTGAAGACTACTCGAAAATTCCTTACTCTGCTATTTTTTCTGA CACAGCATATAAAAAAATAATATCAGATGATTTTCAAAATTTGATTGAAAAGTATCTTTTGAAGAGTGATGAAATTTATG GAGAATATCATTTTTTTGAAAAAGGTAAATTTCATTTAGGGAAACTGAAAAAAATGAACAAAGATATTAAGAACAGTTCT TTTTTCGTTAAAGATAATGCTTTAAAACTTAATGGTAATACCGAAATTAATTCCGAAAAAGATTTGAGTCAAATGATTAA AGAAATAGAAGGGAAAATTTATACTTCTCCTGAATATAAGAAAATTGAAAGTCTGCTTTCTGACGCAACCGGGACTATAT TGAAAGATTTAATTGAATCACATCCTGAATTAATTCAGGAACTCAAAAAAAATAGCATAGAAAATCTAAGACAGAAACTA TGGATTTCCTATTTCAAAGCATTTGAATCTGAAGTGATTGATCTTTATAAATTATATGAAGAGGTCGATGAGAAAGTTAA ATCTTTAAGAATTGATGACACACCTTGGAAAAATGCTTTAGATATTTTTGAAAGCCGGTTTGATGTTCCATATAGAATGA AGATTGAAAACATTAGAAGTTCAGTAATTGGAGAAAGTATACCCAGAGTTAAATTTTCTTTTTGTAAAGATGGGGACTAT AACAACGACTCTGAATCAAATTGGATTGATATTGATAGAGATCAACTAGAAGAAGCTAATGTTTTGAGTCAGGGAGAAAA GAGGGCGCTTTATCTATTAAATATTATATTTGATATAGAAAAGTTAAAAAGAGACAATAAAAATGTTTTAGTCATAGTTG ACGATATAGCTGATTCGTTTGACTATAAGAACAAGTATGCGATTGTTGAGTATCTCAAAGAGATTTCAGAATTAGAAATG TTCAAAATGATCATACTATCCCATAATTTTGATTTTTATAGGACTATTTCGAGTAGATTGAACTTAAGCAGAGAAAATCG CTTTTTAGCCGTTAAGACCGAAAACGGAATTGAAATTGAGAAAGAACTCTATCAAAAGAACCCATTCGAGTTTTGGAAAA ATTCAACTGAAATTAAACACTTTATTGCTTTGATTCCTTTTGTGAGAAACTTGATTGAATACGGTGTAGATAAAAAAATT AATAAATTCATAGAAATTGACAGAGATTTTATGTTGTGTACCCACCTACTTCATTTTAAAAAGCATACGGAGCTAATTAC TGTTGGTCATTTGAAAGAAGTATTTAAAGAATACATAGGTAAAAAAACATTTAATAGTCACATAGATGATTCAGAATATG TTTCGGGATTAATTATTAATGTTGCAAATCAAGTGAAACATGTAAACAATAAGCTCGAAGATAAAGTTATTCTTGCTATT GCAATTAGGTTGGTGTCCGAAAAAATCATGATAGAGAGCTTGAAGAGTTCAACAAAAAAAATAACGTGGGAATTAAAAAG AAATCAAAAAGAAATTGGGAGTACAATGGAATTCTTGACATATTTAGAATCTGCGCCAAATCAAACTAGGGAATTAGTAT CGGCATACATGCAACTTGATAATGTAGAACATATAGGTCTTTTAAGCAAGGTCAATATTATGACTCCTGAGTTAATTCAT ATAAATTCATTTATGTACGAACCTATACTAGATATGGATATTAATGAATTAATTAATCTTTATCAATCATTAAAACATGT AGAAAGAAATCGCGCTTCGATTGTATAA
Upstream 100 bases:
>100_bases CATCGCTTTTCTTATTTTGTTTTAATAGTAATTTTAAAGAAATAAATTCAAAAATATGATAATTTTAAATTATAATGGTT ACTAATGAGGAGTTGAGTAT
Downstream 100 bases:
>100_bases AAATGTAACAAAACAACGTCGTCCCGAATCGGGGCGACGTTGTTTTGTTTATGGGACATCAATTTTGACGGTATACACTT TCGGCATGGCGTCACTTGAC
Product: cytoplasmic protein
Products: NA
Alternate protein names: Macrophage Infection Protein MimD
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MKKIVVDFENCFGIKKLKHEFKFESNKVNSVYAKNGVMKTSFTKVFDCIKNSKTIQIKDQIFGESPIKFDVYLDDNLIKD DEIFVIHSYRDKYETSNLGDLLIDTELKEEVSKLLIKRNELLKKIENLSGIKVSRTTGGKVRFELEPKIIKDMVFHEDSI LMNLNYFIEKDEFEDYSKIPYSAIFSDTAYKKIISDDFQNLIEKYLLKSDEIYGEYHFFEKGKFHLGKLKKMNKDIKNSS FFVKDNALKLNGNTEINSEKDLSQMIKEIEGKIYTSPEYKKIESLLSDATGTILKDLIESHPELIQELKKNSIENLRQKL WISYFKAFESEVIDLYKLYEEVDEKVKSLRIDDTPWKNALDIFESRFDVPYRMKIENIRSSVIGESIPRVKFSFCKDGDY NNDSESNWIDIDRDQLEEANVLSQGEKRALYLLNIIFDIEKLKRDNKNVLVIVDDIADSFDYKNKYAIVEYLKEISELEM FKMIILSHNFDFYRTISSRLNLSRENRFLAVKTENGIEIEKELYQKNPFEFWKNSTEIKHFIALIPFVRNLIEYGVDKKI NKFIEIDRDFMLCTHLLHFKKHTELITVGHLKEVFKEYIGKKTFNSHIDDSEYVSGLIINVANQVKHVNNKLEDKVILAI AIRLVSEKIMIESLKSSTKKITWELKRNQKEIGSTMEFLTYLESAPNQTRELVSAYMQLDNVEHIGLLSKVNIMTPELIH INSFMYEPILDMDINELINLYQSLKHVERNRASIV
Sequences:
>Translated_755_residues MKKIVVDFENCFGIKKLKHEFKFESNKVNSVYAKNGVMKTSFTKVFDCIKNSKTIQIKDQIFGESPIKFDVYLDDNLIKD DEIFVIHSYRDKYETSNLGDLLIDTELKEEVSKLLIKRNELLKKIENLSGIKVSRTTGGKVRFELEPKIIKDMVFHEDSI LMNLNYFIEKDEFEDYSKIPYSAIFSDTAYKKIISDDFQNLIEKYLLKSDEIYGEYHFFEKGKFHLGKLKKMNKDIKNSS FFVKDNALKLNGNTEINSEKDLSQMIKEIEGKIYTSPEYKKIESLLSDATGTILKDLIESHPELIQELKKNSIENLRQKL WISYFKAFESEVIDLYKLYEEVDEKVKSLRIDDTPWKNALDIFESRFDVPYRMKIENIRSSVIGESIPRVKFSFCKDGDY NNDSESNWIDIDRDQLEEANVLSQGEKRALYLLNIIFDIEKLKRDNKNVLVIVDDIADSFDYKNKYAIVEYLKEISELEM FKMIILSHNFDFYRTISSRLNLSRENRFLAVKTENGIEIEKELYQKNPFEFWKNSTEIKHFIALIPFVRNLIEYGVDKKI NKFIEIDRDFMLCTHLLHFKKHTELITVGHLKEVFKEYIGKKTFNSHIDDSEYVSGLIINVANQVKHVNNKLEDKVILAI AIRLVSEKIMIESLKSSTKKITWELKRNQKEIGSTMEFLTYLESAPNQTRELVSAYMQLDNVEHIGLLSKVNIMTPELIH INSFMYEPILDMDINELINLYQSLKHVERNRASIV >Mature_755_residues MKKIVVDFENCFGIKKLKHEFKFESNKVNSVYAKNGVMKTSFTKVFDCIKNSKTIQIKDQIFGESPIKFDVYLDDNLIKD DEIFVIHSYRDKYETSNLGDLLIDTELKEEVSKLLIKRNELLKKIENLSGIKVSRTTGGKVRFELEPKIIKDMVFHEDSI LMNLNYFIEKDEFEDYSKIPYSAIFSDTAYKKIISDDFQNLIEKYLLKSDEIYGEYHFFEKGKFHLGKLKKMNKDIKNSS FFVKDNALKLNGNTEINSEKDLSQMIKEIEGKIYTSPEYKKIESLLSDATGTILKDLIESHPELIQELKKNSIENLRQKL WISYFKAFESEVIDLYKLYEEVDEKVKSLRIDDTPWKNALDIFESRFDVPYRMKIENIRSSVIGESIPRVKFSFCKDGDY NNDSESNWIDIDRDQLEEANVLSQGEKRALYLLNIIFDIEKLKRDNKNVLVIVDDIADSFDYKNKYAIVEYLKEISELEM FKMIILSHNFDFYRTISSRLNLSRENRFLAVKTENGIEIEKELYQKNPFEFWKNSTEIKHFIALIPFVRNLIEYGVDKKI NKFIEIDRDFMLCTHLLHFKKHTELITVGHLKEVFKEYIGKKTFNSHIDDSEYVSGLIINVANQVKHVNNKLEDKVILAI AIRLVSEKIMIESLKSSTKKITWELKRNQKEIGSTMEFLTYLESAPNQTRELVSAYMQLDNVEHIGLLSKVNIMTPELIH INSFMYEPILDMDINELINLYQSLKHVERNRASIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88752; Mature: 88752
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVVDFENCFGIKKLKHEFKFESNKVNSVYAKNGVMKTSFTKVFDCIKNSKTIQIKDQ CCEEEEEHHHHCCHHHHHHHHCCCCCCCCEEHHCCCCCHHHHHHHHHHHCCCCEEEEEHH IFGESPIKFDVYLDDNLIKDDEIFVIHSYRDKYETSNLGDLLIDTELKEEVSKLLIKRNE HCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHH LLKKIENLSGIKVSRTTGGKVRFELEPKIIKDMVFHEDSILMNLNYFIEKDEFEDYSKIP HHHHHHCCCCCEEEECCCCEEEEEECHHHHHHHHHCCCCEEEEEEHEEECCCCCHHHCCC YSAIFSDTAYKKIISDDFQNLIEKYLLKSDEIYGEYHFFEKGKFHLGKLKKMNKDIKNSS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCE FFVKDNALKLNGNTEINSEKDLSQMIKEIEGKIYTSPEYKKIESLLSDATGTILKDLIES EEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH HPELIQELKKNSIENLRQKLWISYFKAFESEVIDLYKLYEEVDEKVKSLRIDDTPWKNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH DIFESRFDVPYRMKIENIRSSVIGESIPRVKFSFCKDGDYNNDSESNWIDIDRDQLEEAN HHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHHH VLSQGEKRALYLLNIIFDIEKLKRDNKNVLVIVDDIADSFDYKNKYAIVEYLKEISELEM HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH FKMIILSHNFDFYRTISSRLNLSRENRFLAVKTENGIEIEKELYQKNPFEFWKNSTEIKH HHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHCCCHHHHH FIALIPFVRNLIEYGVDKKINKFIEIDRDFMLCTHLLHFKKHTELITVGHLKEVFKEYIG HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC KKTFNSHIDDSEYVSGLIINVANQVKHVNNKLEDKVILAIAIRLVSEKIMIESLKSSTKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITWELKRNQKEIGSTMEFLTYLESAPNQTRELVSAYMQLDNVEHIGLLSKVNIMTPELIH EEHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEE INSFMYEPILDMDINELINLYQSLKHVERNRASIV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKIVVDFENCFGIKKLKHEFKFESNKVNSVYAKNGVMKTSFTKVFDCIKNSKTIQIKDQ CCEEEEEHHHHCCHHHHHHHHCCCCCCCCEEHHCCCCCHHHHHHHHHHHCCCCEEEEEHH IFGESPIKFDVYLDDNLIKDDEIFVIHSYRDKYETSNLGDLLIDTELKEEVSKLLIKRNE HCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHH LLKKIENLSGIKVSRTTGGKVRFELEPKIIKDMVFHEDSILMNLNYFIEKDEFEDYSKIP HHHHHHCCCCCEEEECCCCEEEEEECHHHHHHHHHCCCCEEEEEEHEEECCCCCHHHCCC YSAIFSDTAYKKIISDDFQNLIEKYLLKSDEIYGEYHFFEKGKFHLGKLKKMNKDIKNSS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCE FFVKDNALKLNGNTEINSEKDLSQMIKEIEGKIYTSPEYKKIESLLSDATGTILKDLIES EEEECCCEEECCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH HPELIQELKKNSIENLRQKLWISYFKAFESEVIDLYKLYEEVDEKVKSLRIDDTPWKNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH DIFESRFDVPYRMKIENIRSSVIGESIPRVKFSFCKDGDYNNDSESNWIDIDRDQLEEAN HHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHHH VLSQGEKRALYLLNIIFDIEKLKRDNKNVLVIVDDIADSFDYKNKYAIVEYLKEISELEM HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH FKMIILSHNFDFYRTISSRLNLSRENRFLAVKTENGIEIEKELYQKNPFEFWKNSTEIKH HHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHCCCHHHHH FIALIPFVRNLIEYGVDKKINKFIEIDRDFMLCTHLLHFKKHTELITVGHLKEVFKEYIG HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC KKTFNSHIDDSEYVSGLIINVANQVKHVNNKLEDKVILAIAIRLVSEKIMIESLKSSTKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITWELKRNQKEIGSTMEFLTYLESAPNQTRELVSAYMQLDNVEHIGLLSKVNIMTPELIH EEHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEE INSFMYEPILDMDINELINLYQSLKHVERNRASIV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA