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The map label for this gene is ohrR [H]

Identifier: 229918278

GI number: 229918278

Start: 2521904

End: 2522356

Strand: Direct

Name: ohrR [H]

Synonym: EAT1b_2561

Alternate gene names: 229918278

Gene position: 2521904-2522356 (Clockwise)

Preceding gene: 229918275

Following gene: 229918279

Centisome position: 84.07

GC content: 50.11

Gene sequence:

>453_bases
ATGGACCAATCGTTAAAGTTAGAACATCAAATCTGTTTTCAATTGTATACCGCCTCAAAAGAGCTTACCCGGTTATATCG
CCCAATTTTAGCACCGCTAAACCTGACGTATAGTCAATATCTCGTGATGCTTGTCTTATGGGAAGAGGATGGGATTGATT
TGCGGCAACTCGGGTCGCGGTTGACGCTCGACTCTGGGACGTTGTCGCCGCTCATCAAGCGGCTCATCCAAATCGGCTAT
GTGGAGAAGAGTCGTGCCACCGACGACGAACGAAAAATCGTCGTTCGTTTGACAGAGGACGGTAGCGCGTTGCGTGAGCA
GGCGGCGGATGTGCCGTTACAAGTAAGTGGTATGCTGAATATAGACGAAGCGACGTATGTCGCATACATGGAGATGCTCA
CCGATATCAAGACGAGACTACACGATTTCGGGGAGCGTCTGCGCGAGCAGTAA

Upstream 100 bases:

>100_bases
TCATTTTTAACAATTAAGTTGTGCACAATTTAAATTATAGAGCAGTCAAAAAGTTTCGCAAGTGATATGCTTGGCTAAAG
AAGAGTACGGAGGATTACGT

Downstream 100 bases:

>100_bases
GGAAGGAGGAGCCATGTTTCGAAAATTGATCATCCTCTTGATGGGGATTGGACTCTATATGGCTTGGCAATATGAGATGC
CGAACGTCTCTGCCCCGACG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDQSLKLEHQICFQLYTASKELTRLYRPILAPLNLTYSQYLVMLVLWEEDGIDLRQLGSRLTLDSGTLSPLIKRLIQIGY
VEKSRATDDERKIVVRLTEDGSALREQAADVPLQVSGMLNIDEATYVAYMEMLTDIKTRLHDFGERLREQ

Sequences:

>Translated_150_residues
MDQSLKLEHQICFQLYTASKELTRLYRPILAPLNLTYSQYLVMLVLWEEDGIDLRQLGSRLTLDSGTLSPLIKRLIQIGY
VEKSRATDDERKIVVRLTEDGSALREQAADVPLQVSGMLNIDEATYVAYMEMLTDIKTRLHDFGERLREQ
>Mature_150_residues
MDQSLKLEHQICFQLYTASKELTRLYRPILAPLNLTYSQYLVMLVLWEEDGIDLRQLGSRLTLDSGTLSPLIKRLIQIGY
VEKSRATDDERKIVVRLTEDGSALREQAADVPLQVSGMLNIDEATYVAYMEMLTDIKTRLHDFGERLREQ

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17306; Mature: 17306

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSLKLEHQICFQLYTASKELTRLYRPILAPLNLTYSQYLVMLVLWEEDGIDLRQLGSR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHCCC
LTLDSGTLSPLIKRLIQIGYVEKSRATDDERKIVVRLTEDGSALREQAADVPLQVSGMLN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCEEC
IDEATYVAYMEMLTDIKTRLHDFGERLREQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQSLKLEHQICFQLYTASKELTRLYRPILAPLNLTYSQYLVMLVLWEEDGIDLRQLGSR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHCCC
LTLDSGTLSPLIKRLIQIGYVEKSRATDDERKIVVRLTEDGSALREQAADVPLQVSGMLN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCEEC
IDEATYVAYMEMLTDIKTRLHDFGERLREQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]