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The map label for this gene is ykwD [H]

Identifier: 229918279

GI number: 229918279

Start: 2522370

End: 2523284

Strand: Direct

Name: ykwD [H]

Synonym: EAT1b_2562

Alternate gene names: 229918279

Gene position: 2522370-2523284 (Clockwise)

Preceding gene: 229918278

Following gene: 229918282

Centisome position: 84.08

GC content: 50.16

Gene sequence:

>915_bases
ATGTTTCGAAAATTGATCATCCTCTTGATGGGGATTGGACTCTATATGGCTTGGCAATATGAGATGCCGAACGTCTCTGC
CCCGACGAGCATTCAGGTGGAGTCTGAGGTGGCGACCGAACGAGCGACAGACGCGCCAAAGTTCGCAAGTCAGTATGCCG
GGCATGACTGGTATTTGGTCGAACGTGGCGGTGACCGCGGACTTGAACTGATTGATGAGGACGGTGCGAAAAAAGGATTC
TATCAGTTCGAGACAGGTAGCACGTATCGAGGTCTTATACTGAATGAAACGACCCGTGATCAAGTCGAGGACATCGGCTT
CGAGGCAGTGACTTCGTATAATAAAGGACTGAATCGATACTTGATTCCAGACGATCCATCGTTTTCCGTTTTTGCAATCG
ATGGTCAGTATGTCACTTTCTTTTTTGACCAGCATGATGATGACCTCCTGAAAGGGATCTTGTCGGTCGACCGCCGTGTC
GAAGAGGCGAGTGAGGGGTACTATGGTGACTTGTCGAAAGAGGGGACGGTCGCCAATGAGCAGTTGATGCGTATTCTCAT
GAATTGGGATCGGGAGAAATTTGATTTAAATGCTCTAGCTGACTACGAACCACTCTATCCGGTCGTTCGGGCGCATAGTC
AGAACATGGCGGAGAACGACTTCTTCAGCCATACGGACCCAGAAGGACAAGACCCGTTCAATCGAATGGACGAAGCGGGA
CTTTCGTATTCGATGGCCGGCGAAAACTTGGCGATGGGACAGATGAGCGTGTTCCATGCGCATTGGGGACTCATGAACTC
GAAAGGGCATCGTGAGAACATCATGCAGCCACGATTCACCCATGCTGCCGTCGGGCTCGCTTACAACGACGACGGTAGTC
CTTTCTATACAATTAACTTCATTACACCACGTTAA

Upstream 100 bases:

>100_bases
GAAGCGACGTATGTCGCATACATGGAGATGCTCACCGATATCAAGACGAGACTACACGATTTCGGGGAGCGTCTGCGCGA
GCAGTAAGGAAGGAGGAGCC

Downstream 100 bases:

>100_bases
AAGAACGCGCTAATGACGAATTTAGCGCGTTCTTTCGTTTGCTTTATTCAGTGATTGTGAATTTTTGAAGTCGTTCGTTT
AGTAGTTCGGCGACAAAAAT

Product: SCP-like extracellular

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFRKLIILLMGIGLYMAWQYEMPNVSAPTSIQVESEVATERATDAPKFASQYAGHDWYLVERGGDRGLELIDEDGAKKGF
YQFETGSTYRGLILNETTRDQVEDIGFEAVTSYNKGLNRYLIPDDPSFSVFAIDGQYVTFFFDQHDDDLLKGILSVDRRV
EEASEGYYGDLSKEGTVANEQLMRILMNWDREKFDLNALADYEPLYPVVRAHSQNMAENDFFSHTDPEGQDPFNRMDEAG
LSYSMAGENLAMGQMSVFHAHWGLMNSKGHRENIMQPRFTHAAVGLAYNDDGSPFYTINFITPR

Sequences:

>Translated_304_residues
MFRKLIILLMGIGLYMAWQYEMPNVSAPTSIQVESEVATERATDAPKFASQYAGHDWYLVERGGDRGLELIDEDGAKKGF
YQFETGSTYRGLILNETTRDQVEDIGFEAVTSYNKGLNRYLIPDDPSFSVFAIDGQYVTFFFDQHDDDLLKGILSVDRRV
EEASEGYYGDLSKEGTVANEQLMRILMNWDREKFDLNALADYEPLYPVVRAHSQNMAENDFFSHTDPEGQDPFNRMDEAG
LSYSMAGENLAMGQMSVFHAHWGLMNSKGHRENIMQPRFTHAAVGLAYNDDGSPFYTINFITPR
>Mature_304_residues
MFRKLIILLMGIGLYMAWQYEMPNVSAPTSIQVESEVATERATDAPKFASQYAGHDWYLVERGGDRGLELIDEDGAKKGF
YQFETGSTYRGLILNETTRDQVEDIGFEAVTSYNKGLNRYLIPDDPSFSVFAIDGQYVTFFFDQHDDDLLKGILSVDRRV
EEASEGYYGDLSKEGTVANEQLMRILMNWDREKFDLNALADYEPLYPVVRAHSQNMAENDFFSHTDPEGQDPFNRMDEAG
LSYSMAGENLAMGQMSVFHAHWGLMNSKGHRENIMQPRFTHAAVGLAYNDDGSPFYTINFITPR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 34571; Mature: 34571

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKLIILLMGIGLYMAWQYEMPNVSAPTSIQVESEVATERATDAPKFASQYAGHDWYLV
CHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHCCCCEEEE
ERGGDRGLELIDEDGAKKGFYQFETGSTYRGLILNETTRDQVEDIGFEAVTSYNKGLNRY
ECCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCEE
LIPDDPSFSVFAIDGQYVTFFFDQHDDDLLKGILSVDRRVEEASEGYYGDLSKEGTVANE
ECCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
QLMRILMNWDREKFDLNALADYEPLYPVVRAHSQNMAENDFFSHTDPEGQDPFNRMDEAG
HHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
LSYSMAGENLAMGQMSVFHAHWGLMNSKGHRENIMQPRFTHAAVGLAYNDDGSPFYTINF
CEEEECCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
ITPR
ECCC
>Mature Secondary Structure
MFRKLIILLMGIGLYMAWQYEMPNVSAPTSIQVESEVATERATDAPKFASQYAGHDWYLV
CHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHCCCCEEEE
ERGGDRGLELIDEDGAKKGFYQFETGSTYRGLILNETTRDQVEDIGFEAVTSYNKGLNRY
ECCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCEE
LIPDDPSFSVFAIDGQYVTFFFDQHDDDLLKGILSVDRRVEEASEGYYGDLSKEGTVANE
ECCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
QLMRILMNWDREKFDLNALADYEPLYPVVRAHSQNMAENDFFSHTDPEGQDPFNRMDEAG
HHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
LSYSMAGENLAMGQMSVFHAHWGLMNSKGHRENIMQPRFTHAAVGLAYNDDGSPFYTINF
CEEEECCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
ITPR
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]