| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is trxA [C]
Identifier: 229918232
GI number: 229918232
Start: 2478477
End: 2478899
Strand: Direct
Name: trxA [C]
Synonym: EAT1b_2513
Alternate gene names: 229918232
Gene position: 2478477-2478899 (Clockwise)
Preceding gene: 229918231
Following gene: 229918233
Centisome position: 82.62
GC content: 46.1
Gene sequence:
>423_bases ATGAAAAACCCTGAAAAACGCGCGAATTTTATCACGTTCGCCATCATCGGTGCGATTATCGTCATCGGAATCGGTTTGTT GTTCTTTTTAAATGGAGCGAATACCGACGACGGTGTCAACGCCGTCACAGCAGATGAATTACAACAACAATTAGACCAAG ATGGTGAAGTCGTCGCTTACTTCTGGCAAACGGGCTGCGAATACTGTGAGCAAGTGAAGCCTTATGTCGAACCCCTCATC GAAGAATATGATGCGGTCTCGATCAACTTGGCTGACCATAACGTATGGACGACGTATGGGATTGAAGGTACGCCGACTAT CATCCGCTTTGAGGATGGAAAAGAAGTCGGTCGCATTGAAGGAGCGGTCTCTGAACAACAATATGAGACGTTCTTTAAAA ATGAGGAGGCCAAAGAGGAATGA
Upstream 100 bases:
>100_bases TCAGCGACGTTGCACAAGAGAAGTAAGCCGTCTACAATCAAACTGACTCGTGCATGAGTCAGTCTTTTTTCTTTATTCAA CATAGAGGAGGATTACACAT
Downstream 100 bases:
>100_bases AGCGTCGTTTCTACCAAACGTTATTTGAGCTGAATGCCTCGCCTTGGATCGCCACACGCCTTAAGCGTTTCGCAGAATCA AATGTGAGTCGTCACTTGAT
Product: thioredoxin
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; Protein Disulfide Oxidoreductase Trx Domain; Thioredoxin Domain Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKNPEKRANFITFAIIGAIIVIGIGLLFFLNGANTDDGVNAVTADELQQQLDQDGEVVAYFWQTGCEYCEQVKPYVEPLI EEYDAVSINLADHNVWTTYGIEGTPTIIRFEDGKEVGRIEGAVSEQQYETFFKNEEAKEE
Sequences:
>Translated_140_residues MKNPEKRANFITFAIIGAIIVIGIGLLFFLNGANTDDGVNAVTADELQQQLDQDGEVVAYFWQTGCEYCEQVKPYVEPLI EEYDAVSINLADHNVWTTYGIEGTPTIIRFEDGKEVGRIEGAVSEQQYETFFKNEEAKEE >Mature_140_residues MKNPEKRANFITFAIIGAIIVIGIGLLFFLNGANTDDGVNAVTADELQQQLDQDGEVVAYFWQTGCEYCEQVKPYVEPLI EEYDAVSINLADHNVWTTYGIEGTPTIIRFEDGKEVGRIEGAVSEQQYETFFKNEEAKEE
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15735; Mature: 15735
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPEKRANFITFAIIGAIIVIGIGLLFFLNGANTDDGVNAVTADELQQQLDQDGEVVAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEHH FWQTGCEYCEQVKPYVEPLIEEYDAVSINLADHNVWTTYGIEGTPTIIRFEDGKEVGRIE HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEECCCCHHHHHH GAVSEQQYETFFKNEEAKEE HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKNPEKRANFITFAIIGAIIVIGIGLLFFLNGANTDDGVNAVTADELQQQLDQDGEVVAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEHH FWQTGCEYCEQVKPYVEPLIEEYDAVSINLADHNVWTTYGIEGTPTIIRFEDGKEVGRIE HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEECCCCHHHHHH GAVSEQQYETFFKNEEAKEE HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA