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The map label for this gene is ganQ [H]

Identifier: 229918224

GI number: 229918224

Start: 2468708

End: 2469541

Strand: Direct

Name: ganQ [H]

Synonym: EAT1b_2504

Alternate gene names: 229918224

Gene position: 2468708-2469541 (Clockwise)

Preceding gene: 229918223

Following gene: 229918225

Centisome position: 82.29

GC content: 46.76

Gene sequence:

>834_bases
ATGAAAAAACAAAAACGAATCAATTTGGCGATCTCGTATGTCATCTTGACGCTTGCGTCGATCATCATTCTCTATCCGAT
GCTTTGGGTTGTCGGTACATCGTTCAACCCGGGGCGTACGATTACGTCAACGATTATTCCGTCGAACCCGACGTTTATTC
ACTACAAAAACTTGTTTGACCTAACGATTTCGGATTATAGTTTATGGTATGTGAACACTTTGAAAATCGCTTTCATCACG
ATGGCACTATCTGTCGTCTTGGTGACGATTACTGGATACGTCTTCTCACGTTACCGCTTCGTCGGACGGAAGAACTCGCT
CGTCTTGTTCCTCGTCCTTCAGATGGTGCCACAGTTCGTTGCGATCATCGCGATTTATGTATTGCTCAATATGCTTAATC
TTCTTGACACACATACAGCGCTCATCTTGCTCTATGCGGGTGGTGCGATTCCGATGAACACGTACTTGGCGAAAGGGTAC
TTCGACACGATTCCAAAAGAACTTGACGAAGCAGCCCGCATGGATGGTGCCGGTCACCTCCGAATCTTCTGGCAAATCAT
CTTGCCGCTCGCGAAGCCGATTGTCGCAACGATTGCTCTCTTTAACTTCATGGGACCATTCAACGACTTTATCTTGGCAT
CGCTCGTCCTTCGTTCACCAGAGAAACAAACGTTGGCAGTTGGCCTTTACAACATGATTTCGAAACAGTTCGATAATAAC
TTCACGTTATTCGCGGCAGGTGCGGTTCTTTCGGCCCTTCCAATCGTCATCTTGTTCTTCATGTTCCAACGCTACTTCGT
TTCTGGCCTCACAGCGGGTGGTACGAAAGGATAA

Upstream 100 bases:

>100_bases
GCGGCTGCGATCACACTCATCTTGTCATTCTTCATTATGACACTTGCCGTGATCCAGTTCCGTCGGACAAAATCTTTCAA
AGACGAGGATATGATCTGAT

Downstream 100 bases:

>100_bases
TACTCGTAAAAGGAGGAAGCGATATGAGGCGAGGCGTCGTGCTCGTGCTCCTGTCGCTTCTTTTGTTTCCGACCGTCGTC
GGAGCAAAGGAAGCCGCTAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKQKRINLAISYVILTLASIIILYPMLWVVGTSFNPGRTITSTIIPSNPTFIHYKNLFDLTISDYSLWYVNTLKIAFIT
MALSVVLVTITGYVFSRYRFVGRKNSLVLFLVLQMVPQFVAIIAIYVLLNMLNLLDTHTALILLYAGGAIPMNTYLAKGY
FDTIPKELDEAARMDGAGHLRIFWQIILPLAKPIVATIALFNFMGPFNDFILASLVLRSPEKQTLAVGLYNMISKQFDNN
FTLFAAGAVLSALPIVILFFMFQRYFVSGLTAGGTKG

Sequences:

>Translated_277_residues
MKKQKRINLAISYVILTLASIIILYPMLWVVGTSFNPGRTITSTIIPSNPTFIHYKNLFDLTISDYSLWYVNTLKIAFIT
MALSVVLVTITGYVFSRYRFVGRKNSLVLFLVLQMVPQFVAIIAIYVLLNMLNLLDTHTALILLYAGGAIPMNTYLAKGY
FDTIPKELDEAARMDGAGHLRIFWQIILPLAKPIVATIALFNFMGPFNDFILASLVLRSPEKQTLAVGLYNMISKQFDNN
FTLFAAGAVLSALPIVILFFMFQRYFVSGLTAGGTKG
>Mature_277_residues
MKKQKRINLAISYVILTLASIIILYPMLWVVGTSFNPGRTITSTIIPSNPTFIHYKNLFDLTISDYSLWYVNTLKIAFIT
MALSVVLVTITGYVFSRYRFVGRKNSLVLFLVLQMVPQFVAIIAIYVLLNMLNLLDTHTALILLYAGGAIPMNTYLAKGY
FDTIPKELDEAARMDGAGHLRIFWQIILPLAKPIVATIALFNFMGPFNDFILASLVLRSPEKQTLAVGLYNMISKQFDNN
FTLFAAGAVLSALPIVILFFMFQRYFVSGLTAGGTKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=292, Percent_Identity=35.6164383561644, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=33.0960854092527, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1789860, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30977; Mature: 30977

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQKRINLAISYVILTLASIIILYPMLWVVGTSFNPGRTITSTIIPSNPTFIHYKNLFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCEEE
LTISDYSLWYVNTLKIAFITMALSVVLVTITGYVFSRYRFVGRKNSLVLFLVLQMVPQFV
EEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIIAIYVLLNMLNLLDTHTALILLYAGGAIPMNTYLAKGYFDTIPKELDEAARMDGAGHL
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RIFWQIILPLAKPIVATIALFNFMGPFNDFILASLVLRSPEKQTLAVGLYNMISKQFDNN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
FTLFAAGAVLSALPIVILFFMFQRYFVSGLTAGGTKG
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKQKRINLAISYVILTLASIIILYPMLWVVGTSFNPGRTITSTIIPSNPTFIHYKNLFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCEEE
LTISDYSLWYVNTLKIAFITMALSVVLVTITGYVFSRYRFVGRKNSLVLFLVLQMVPQFV
EEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIIAIYVLLNMLNLLDTHTALILLYAGGAIPMNTYLAKGYFDTIPKELDEAARMDGAGHL
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RIFWQIILPLAKPIVATIALFNFMGPFNDFILASLVLRSPEKQTLAVGLYNMISKQFDNN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
FTLFAAGAVLSALPIVILFFMFQRYFVSGLTAGGTKG
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]