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The map label for this gene is crtB [H]

Identifier: 229918212

GI number: 229918212

Start: 2454879

End: 2455718

Strand: Direct

Name: crtB [H]

Synonym: EAT1b_2492

Alternate gene names: 229918212

Gene position: 2454879-2455718 (Clockwise)

Preceding gene: 229918211

Following gene: 229918219

Centisome position: 81.83

GC content: 49.05

Gene sequence:

>840_bases
GTGACGACACAAGAAGCGTATCGTCAATGTGAGGAAATCATGAAGAAGGGCTCGTTGACCTTTTATCGGGCCTTCTCTTT
GCTCTCAAAACCAGACCGGCAAGCAGTCATGGCCGTATATACGTTCTGTCGCACTCTCGATGATGCGGTCGATGAATCAG
ACCGTCCAGAAGAGAGTTTGGCAGTATTTTTGCATGACTTCGACCGCTTTTTAGCCGGTTACGACCTAGATGAAGCATTA
TGGGTTGCCCTTCGTGATGTATGGAAACGCTATGACATGGACGTCGAACCATTCTTTGAGTTGGCGGAAGGGATGAAATG
GGACTTACATAAGTCGCGGTATGAGACGCTCGAAGAGACCGAGCAGTATAGCTATTATGCAGCGAGTACGGTCGGCTTGA
TGCTCCTCCCGATTCTAGTCCCAAATCAGGACGAAGCGACGACACGTCAGCTAAGACAAGGCGCCATCGACCTTGGCATT
GCGATGCAGCTGACCAACATTTTACGAGATGTCGGTGAAGATTTGAATCGAGACCGCATCTATTTACCACGTACGATGAT
GCGTCAGTACGGTGTGAGTGAAGAGATGTTACAACAACGAGAAGTGACCCCTGTCTTTATCGATTTATGGGAGACCTTGG
CGAGTCGAGCAGAGTTCTTGTATGCACGGGCACGGGAAACCCATCATCTGTACCCACTTGCGAGTCGAAAGCCGGTCCAG
GCAGCAGCTCTTCTCTATGAAGGAATTCTTGATGCAGCACGTGCGAATCGACATGACGTCTTCACGAAGCGAGCATACGT
ATCGACCTTACAAAAAGGAAAGTTGTTGGCAAAACTATAA

Upstream 100 bases:

>100_bases
GTGGGTGCATCCGTCCATCCATGTGGTGGCGTACCCATCGTCATGATTGGGTCACAATTACTTGTGAAAAAAATGGAAGA
AGAAATGGGGGCAATGCATC

Downstream 100 bases:

>100_bases
GCAATCTGATTCCCTGTAGACGCTTGATGGCGTCTACAGTTTTTTGCGTAAAAAAAACCACTTTTGGCGGGGGACCAAAA
GTGGCGTAAGCGTTATGTGA

Product: Phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTTQEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEESLAVFLHDFDRFLAGYDLDEAL
WVALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLEETEQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGI
AMQLTNILRDVGEDLNRDRIYLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKPVQ
AAALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAKL

Sequences:

>Translated_279_residues
MTTQEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEESLAVFLHDFDRFLAGYDLDEAL
WVALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLEETEQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGI
AMQLTNILRDVGEDLNRDRIYLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKPVQ
AAALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAKL
>Mature_278_residues
TTQEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEESLAVFLHDFDRFLAGYDLDEALW
VALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLEETEQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGIA
MQLTNILRDVGEDLNRDRIYLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKPVQA
AALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAKL

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 32464; Mature: 32333

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEESL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AVFLHDFDRFLAGYDLDEALWVALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLEET
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
EQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGIAMQLTNILRDVGEDLNRDRI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKPVQ
ECCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
AAALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAKL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure 
TTQEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEESL
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AVFLHDFDRFLAGYDLDEALWVALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLEET
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
EQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGIAMQLTNILRDVGEDLNRDRI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKPVQ
ECCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
AAALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAKL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537409 [H]