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The map label for this gene is carA2 [H]

Identifier: 229918211

GI number: 229918211

Start: 2453432

End: 2454910

Strand: Direct

Name: carA2 [H]

Synonym: EAT1b_2491

Alternate gene names: 229918211

Gene position: 2453432-2454910 (Clockwise)

Preceding gene: 229918210

Following gene: 229918212

Centisome position: 81.78

GC content: 46.04

Gene sequence:

>1479_bases
ATGAATATTAGCTTTGTCGGGGCAGGGGTCGGTACATTATATGCCGCTCTTTTATTGACGAAACGCAACCCGTCACTTCA
ACTCACGATTTATGAGAAAGAGGCACGGGTTGGTGGACGCTTGAACTACGTTGAATTCGATAATGGGGCGAAAGTCGATG
AAGGTCCAACGATCGTCTTATTGCCGAGTAAACTGAAGCAACAATTGATCGAGGCGGGTCTTCCTGAACATGAAGTAGAG
TTGATTGAAGTCAATCCGCTTTATCGCTTGCGGTATCAAGACGGAACATCGTTCTTTAAATATCGAGAAATCGAGAAACA
GGCGGAAGAAATCGAACGAGCTTTCGGTGAAGGAGATGCTTTCCGTCAGTACATGTCCCAAAAGAAAGAAGAGTATCGGA
TTGGCTTCGATACGTTTTTAGATCGTAGCTATGCCTCGAAGACGGAGTTATTCGAGCCTAAACTGCTTCTCCTTCTCATG
CGGTTAAAAGCATATGAGACGGCTCATGCGAACATGAAACGCTTCTTTAAAGACGAGCGTTTACGTGTCGCCTATAGTTT
GCAGACCCTCTATATCGGTGGAAATCCTTATGCCACGCCTTCTTTATATGGACTCATCCCTTATCGTGAACAAGAAGAAG
GAGTCTGGTATGTAAAAGGAGGATATTTCTCGCTAGCGACGAAAATGGAACAAGAGTTGAAGCGTCGAGGTGTTCGTTTC
GTGATGAATGCTACCGTTAATCGTGTCCATGTGACGGATGGGGTGGCCGATGGCATCACGGTCAATGACGAATATGTACC
GTATGATGCCGTCGTCGTGAACGGGGATTTTCCACTCATGGAGCGCTTGATTGATGATGTGACGCCAAAAACGTATGAAC
CGTCAAGCGGTACGTTACTTCTTTACTTCACCGTCAATGGCGAACTTGATTTACCGGTTCATCAATTCGATTTACCGAAT
GATTTTGAAGGATCGATGCGTACAATCTTCGAGGATGGTAAACTAAGTGAGTATCCAGCGATGTACACCTTTAATCCATC
GCGAATGGATGCGACTCTTGCGCCAGAAGGAACGAGCGTATTATATGTTCTTGTCCCGGTTCCGCGAAAATTGGAACGGG
AAGACTTTGAGTCACAAGGGACAATCGAACATCTATTAGAAAGAATCGAGGCATTCATACCTGATTTTCGTGAACGTGTC
ATCGAGATGAAAGTACGGACACCGATGGATGCTGAGCGATTCGGATTGTTTGAGGGAGGAAGTTTTGGGATTGCACCAAA
GTTATCCCAGTCAGCCGCCTTCAAACCACAGGCGAGACCCTTCCCAAAAATCGAACGTCTTTATGCGGTGGGTGCATCCG
TCCATCCATGTGGTGGCGTACCCATCGTCATGATTGGGTCACAATTACTTGTGAAAAAAATGGAAGAAGAAATGGGGGCA
ATGCATCGTGACGACACAAGAAGCGTATCGTCAATGTGA

Upstream 100 bases:

>100_bases
TCGTCGGAGGTGGGACCCACCCAGGAAGTGGGCTTCCGACCATCTTTGAATCAGCACGGATCACGACGAACCTTTTGCGT
GACCGGGCAGGTGTCGGCCG

Downstream 100 bases:

>100_bases
GGAAATCATGAAGAAGGGCTCGTTGACCTTTTATCGGGCCTTCTCTTTGCTCTCAAAACCAGACCGGCAAGCAGTCATGG
CCGTATATACGTTCTGTCGC

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MNISFVGAGVGTLYAALLLTKRNPSLQLTIYEKEARVGGRLNYVEFDNGAKVDEGPTIVLLPSKLKQQLIEAGLPEHEVE
LIEVNPLYRLRYQDGTSFFKYREIEKQAEEIERAFGEGDAFRQYMSQKKEEYRIGFDTFLDRSYASKTELFEPKLLLLLM
RLKAYETAHANMKRFFKDERLRVAYSLQTLYIGGNPYATPSLYGLIPYREQEEGVWYVKGGYFSLATKMEQELKRRGVRF
VMNATVNRVHVTDGVADGITVNDEYVPYDAVVVNGDFPLMERLIDDVTPKTYEPSSGTLLLYFTVNGELDLPVHQFDLPN
DFEGSMRTIFEDGKLSEYPAMYTFNPSRMDATLAPEGTSVLYVLVPVPRKLEREDFESQGTIEHLLERIEAFIPDFRERV
IEMKVRTPMDAERFGLFEGGSFGIAPKLSQSAAFKPQARPFPKIERLYAVGASVHPCGGVPIVMIGSQLLVKKMEEEMGA
MHRDDTRSVSSM

Sequences:

>Translated_492_residues
MNISFVGAGVGTLYAALLLTKRNPSLQLTIYEKEARVGGRLNYVEFDNGAKVDEGPTIVLLPSKLKQQLIEAGLPEHEVE
LIEVNPLYRLRYQDGTSFFKYREIEKQAEEIERAFGEGDAFRQYMSQKKEEYRIGFDTFLDRSYASKTELFEPKLLLLLM
RLKAYETAHANMKRFFKDERLRVAYSLQTLYIGGNPYATPSLYGLIPYREQEEGVWYVKGGYFSLATKMEQELKRRGVRF
VMNATVNRVHVTDGVADGITVNDEYVPYDAVVVNGDFPLMERLIDDVTPKTYEPSSGTLLLYFTVNGELDLPVHQFDLPN
DFEGSMRTIFEDGKLSEYPAMYTFNPSRMDATLAPEGTSVLYVLVPVPRKLEREDFESQGTIEHLLERIEAFIPDFRERV
IEMKVRTPMDAERFGLFEGGSFGIAPKLSQSAAFKPQARPFPKIERLYAVGASVHPCGGVPIVMIGSQLLVKKMEEEMGA
MHRDDTRSVSSM
>Mature_492_residues
MNISFVGAGVGTLYAALLLTKRNPSLQLTIYEKEARVGGRLNYVEFDNGAKVDEGPTIVLLPSKLKQQLIEAGLPEHEVE
LIEVNPLYRLRYQDGTSFFKYREIEKQAEEIERAFGEGDAFRQYMSQKKEEYRIGFDTFLDRSYASKTELFEPKLLLLLM
RLKAYETAHANMKRFFKDERLRVAYSLQTLYIGGNPYATPSLYGLIPYREQEEGVWYVKGGYFSLATKMEQELKRRGVRF
VMNATVNRVHVTDGVADGITVNDEYVPYDAVVVNGDFPLMERLIDDVTPKTYEPSSGTLLLYFTVNGELDLPVHQFDLPN
DFEGSMRTIFEDGKLSEYPAMYTFNPSRMDATLAPEGTSVLYVLVPVPRKLEREDFESQGTIEHLLERIEAFIPDFRERV
IEMKVRTPMDAERFGLFEGGSFGIAPKLSQSAAFKPQARPFPKIERLYAVGASVHPCGGVPIVMIGSQLLVKKMEEEMGA
MHRDDTRSVSSM

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55958; Mature: 55958

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISFVGAGVGTLYAALLLTKRNPSLQLTIYEKEARVGGRLNYVEFDNGAKVDEGPTIVL
CCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEE
LPSKLKQQLIEAGLPEHEVELIEVNPLYRLRYQDGTSFFKYREIEKQAEEIERAFGEGDA
ECHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHH
FRQYMSQKKEEYRIGFDTFLDRSYASKTELFEPKLLLLLMRLKAYETAHANMKRFFKDER
HHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRVAYSLQTLYIGGNPYATPSLYGLIPYREQEEGVWYVKGGYFSLATKMEQELKRRGVRF
EEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEE
VMNATVNRVHVTDGVADGITVNDEYVPYDAVVVNGDFPLMERLIDDVTPKTYEPSSGTLL
EEECCCCEEEEECCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEE
LYFTVNGELDLPVHQFDLPNDFEGSMRTIFEDGKLSEYPAMYTFNPSRMDATLAPEGTSV
EEEEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECHHHCCEEECCCCCEE
LYVLVPVPRKLEREDFESQGTIEHLLERIEAFIPDFRERVIEMKVRTPMDAERFGLFEGG
EEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
SFGIAPKLSQSAAFKPQARPFPKIERLYAVGASVHPCGGVPIVMIGSQLLVKKMEEEMGA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHCC
MHRDDTRSVSSM
CCCCCCHHHCCC
>Mature Secondary Structure
MNISFVGAGVGTLYAALLLTKRNPSLQLTIYEKEARVGGRLNYVEFDNGAKVDEGPTIVL
CCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEE
LPSKLKQQLIEAGLPEHEVELIEVNPLYRLRYQDGTSFFKYREIEKQAEEIERAFGEGDA
ECHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHH
FRQYMSQKKEEYRIGFDTFLDRSYASKTELFEPKLLLLLMRLKAYETAHANMKRFFKDER
HHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRVAYSLQTLYIGGNPYATPSLYGLIPYREQEEGVWYVKGGYFSLATKMEQELKRRGVRF
EEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEE
VMNATVNRVHVTDGVADGITVNDEYVPYDAVVVNGDFPLMERLIDDVTPKTYEPSSGTLL
EEECCCCEEEEECCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEE
LYFTVNGELDLPVHQFDLPNDFEGSMRTIFEDGKLSEYPAMYTFNPSRMDATLAPEGTSV
EEEEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECHHHCCEEECCCCCEE
LYVLVPVPRKLEREDFESQGTIEHLLERIEAFIPDFRERVIEMKVRTPMDAERFGLFEGG
EEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
SFGIAPKLSQSAAFKPQARPFPKIERLYAVGASVHPCGGVPIVMIGSQLLVKKMEEEMGA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHCC
MHRDDTRSVSSM
CCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7588751 [H]