| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918163
Identifier: 229918163
GI number: 229918163
Start: 2401276
End: 2402394
Strand: Direct
Name: 229918163
Synonym: EAT1b_2443
Alternate gene names: NA
Gene position: 2401276-2402394 (Clockwise)
Preceding gene: 229918160
Following gene: 229918164
Centisome position: 80.05
GC content: 48.08
Gene sequence:
>1119_bases TTGGACGAGTTATTAAAGATTTTACTCATGATATTGATCGGGGCGACCATCGGGGGCGTGACCAACTTTCTCGCCATCAA GATGTTGTTCCGACCACACGAACCGAAATACATCGGTTCATTCCGGATTCCTTTTACACCAGGACTTATTCCGAAACGTC GAGATGAACTGGCATCTAGTTTAGGGAAAACGGTCGTCAAACATTTATTGACACCAGAGGGTATGCGGAAGCGATTGCTA GATGACCAAGTGACGATGCATATTACGCACTTTGCGCAACAAGAGGTTCAGACGATGTTACGCTCGGATAAGACGGTTCG CGAGCTATTGGAACCCCTCTATCCGAACGCAGAGGCACGATTCCTCACGCTAGCAGATGACAAACTACGTGACGAGCTAT CGAACGTCATGGCTGAAGTGAAAGAACGAAAGCTGTTTGAGTTACTTGGAGAAGAAGGGATGGACCGTGTACGAGTGGTC ATTCCTGAAATCGTGGAGGCGCTTCTCGTCAAATCAGAGGAATATTTCTATTCTCCTGAAGGTGAGGCGCAACTTCGGCA CATGGTTGACTCGTTCGTCCAGCGTCGTCTCGGATTTATCGCAGGGTTCATTCAAAACATGAACTTTGTCGAGATGGTTC GACCAGAAATCGTCAACATCTTACGTGGTCAATCAACCCGTGACGGAATGACGACGATGATTACGCGTGAATTTGAGCGA TTCAGTGAGAAGACGGTCGATACACTGATCGATGACCGACTCGAAGCACGACTCATCGATGGCATCACAGACCAAGTCGT ATCTCGTTTGCCAATCGGACAATTATTGGATCGTCCGGTCTCGTCGTATACACAGTCCGTCGAATCCCGCATTGTCGACG AACTCGTTCCACAAGGTGTCACGCTTGTCATTGAGCGCTTCACGAACCAAATGGAGACGATCATGGACCGATTGAAGATT GATAAGATTGTGCAAGAGCAAGTCCAATCACTCGACACGTCGTACCTCGAAGAAATCGTCTTATCGATCTCGAAACGAGA GTTCCGGGCAATAACATGGCTTGGTGCGCTGTTAGGTGGTATGATTGGGTTGATTCAAGGGTTGATTGCCATCTTGTGA
Upstream 100 bases:
>100_bases GATGGACAGCAGTCGGAAAAATCGATTTAATACGATCAAACGTATTCAATACTATCACCTCAACAACAATGTATCATATT TCAGATCGGAGGCTTGCAGT
Downstream 100 bases:
>100_bases TGGCTTAACCCTAATAGCATTTAGGAGGACGTTACATGTCACAAACAAACTTGTACGACCAAGCTTACCAATTGGAGAAA GCACTTCGCGATTCTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MDELLKILLMILIGATIGGVTNFLAIKMLFRPHEPKYIGSFRIPFTPGLIPKRRDELASSLGKTVVKHLLTPEGMRKRLL DDQVTMHITHFAQQEVQTMLRSDKTVRELLEPLYPNAEARFLTLADDKLRDELSNVMAEVKERKLFELLGEEGMDRVRVV IPEIVEALLVKSEEYFYSPEGEAQLRHMVDSFVQRRLGFIAGFIQNMNFVEMVRPEIVNILRGQSTRDGMTTMITREFER FSEKTVDTLIDDRLEARLIDGITDQVVSRLPIGQLLDRPVSSYTQSVESRIVDELVPQGVTLVIERFTNQMETIMDRLKI DKIVQEQVQSLDTSYLEEIVLSISKREFRAITWLGALLGGMIGLIQGLIAIL
Sequences:
>Translated_372_residues MDELLKILLMILIGATIGGVTNFLAIKMLFRPHEPKYIGSFRIPFTPGLIPKRRDELASSLGKTVVKHLLTPEGMRKRLL DDQVTMHITHFAQQEVQTMLRSDKTVRELLEPLYPNAEARFLTLADDKLRDELSNVMAEVKERKLFELLGEEGMDRVRVV IPEIVEALLVKSEEYFYSPEGEAQLRHMVDSFVQRRLGFIAGFIQNMNFVEMVRPEIVNILRGQSTRDGMTTMITREFER FSEKTVDTLIDDRLEARLIDGITDQVVSRLPIGQLLDRPVSSYTQSVESRIVDELVPQGVTLVIERFTNQMETIMDRLKI DKIVQEQVQSLDTSYLEEIVLSISKREFRAITWLGALLGGMIGLIQGLIAIL >Mature_372_residues MDELLKILLMILIGATIGGVTNFLAIKMLFRPHEPKYIGSFRIPFTPGLIPKRRDELASSLGKTVVKHLLTPEGMRKRLL DDQVTMHITHFAQQEVQTMLRSDKTVRELLEPLYPNAEARFLTLADDKLRDELSNVMAEVKERKLFELLGEEGMDRVRVV IPEIVEALLVKSEEYFYSPEGEAQLRHMVDSFVQRRLGFIAGFIQNMNFVEMVRPEIVNILRGQSTRDGMTTMITREFER FSEKTVDTLIDDRLEARLIDGITDQVVSRLPIGQLLDRPVSSYTQSVESRIVDELVPQGVTLVIERFTNQMETIMDRLKI DKIVQEQVQSLDTSYLEEIVLSISKREFRAITWLGALLGGMIGLIQGLIAIL
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 42531; Mature: 42531
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELLKILLMILIGATIGGVTNFLAIKMLFRPHEPKYIGSFRIPFTPGLIPKRRDELASS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCHHHHHHHH LGKTVVKHLLTPEGMRKRLLDDQVTMHITHFAQQEVQTMLRSDKTVRELLEPLYPNAEAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCE FLTLADDKLRDELSNVMAEVKERKLFELLGEEGMDRVRVVIPEIVEALLVKSEEYFYSPE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHCCCCC GEAQLRHMVDSFVQRRLGFIAGFIQNMNFVEMVRPEIVNILRGQSTRDGMTTMITREFER CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FSEKTVDTLIDDRLEARLIDGITDQVVSRLPIGQLLDRPVSSYTQSVESRIVDELVPQGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLVIERFTNQMETIMDRLKIDKIVQEQVQSLDTSYLEEIVLSISKREFRAITWLGALLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGLIQGLIAIL HHHHHHHHHHHC >Mature Secondary Structure MDELLKILLMILIGATIGGVTNFLAIKMLFRPHEPKYIGSFRIPFTPGLIPKRRDELASS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCHHHHHHHH LGKTVVKHLLTPEGMRKRLLDDQVTMHITHFAQQEVQTMLRSDKTVRELLEPLYPNAEAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCE FLTLADDKLRDELSNVMAEVKERKLFELLGEEGMDRVRVVIPEIVEALLVKSEEYFYSPE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHCCCCC GEAQLRHMVDSFVQRRLGFIAGFIQNMNFVEMVRPEIVNILRGQSTRDGMTTMITREFER CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FSEKTVDTLIDDRLEARLIDGITDQVVSRLPIGQLLDRPVSSYTQSVESRIVDELVPQGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLVIERFTNQMETIMDRLKIDKIVQEQVQSLDTSYLEEIVLSISKREFRAITWLGALLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGLIQGLIAIL HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA