| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918164
Identifier: 229918164
GI number: 229918164
Start: 2402430
End: 2402801
Strand: Direct
Name: 229918164
Synonym: EAT1b_2444
Alternate gene names: NA
Gene position: 2402430-2402801 (Clockwise)
Preceding gene: 229918163
Following gene: 229918165
Centisome position: 80.08
GC content: 44.35
Gene sequence:
>372_bases ATGTCACAAACAAACTTGTACGACCAAGCTTACCAATTGGAGAAAGCACTTCGCGATTCTGAAGAGTTCACAACACTCTC TTCTTTATACGATCGTGTCAATGCGGATGCGGAAGCGAACCAGTTGTTCGCTGACTTCCGTAACATCCAAATGACGCTTC AACAAAAGCAGATGCAAGGAGAGGAAATCTCTGAGCAGGAAATGATGGATGCGCAAACGAAAATGATGAACGTTCAACAG AACGAATTGATCATGGAGCTCATGCAAGAAGAGCAACGCATGCACCAACTCGTCACAGAAGTGACGAAAATCATCATGAA ACCACTTGAGGAGCTTTACGCGCCGATGGTGAACGAAAACGAAGTTCAATAA
Upstream 100 bases:
>100_bases CATGGCTTGGTGCGCTGTTAGGTGGTATGATTGGGTTGATTCAAGGGTTGATTGCCATCTTGTGATGGCTTAACCCTAAT AGCATTTAGGAGGACGTTAC
Downstream 100 bases:
>100_bases GAAATGATGAGCGGATGGCTATTGAGCCATCCGTTTTTTTGTTGATGAGATTGTCACACGCTTGAAGTAAGCGCTTACAT AAAGTGGGTTATAATGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSQTNLYDQAYQLEKALRDSEEFTTLSSLYDRVNADAEANQLFADFRNIQMTLQQKQMQGEEISEQEMMDAQTKMMNVQQ NELIMELMQEEQRMHQLVTEVTKIIMKPLEELYAPMVNENEVQ
Sequences:
>Translated_123_residues MSQTNLYDQAYQLEKALRDSEEFTTLSSLYDRVNADAEANQLFADFRNIQMTLQQKQMQGEEISEQEMMDAQTKMMNVQQ NELIMELMQEEQRMHQLVTEVTKIIMKPLEELYAPMVNENEVQ >Mature_122_residues SQTNLYDQAYQLEKALRDSEEFTTLSSLYDRVNADAEANQLFADFRNIQMTLQQKQMQGEEISEQEMMDAQTKMMNVQQN ELIMELMQEEQRMHQLVTEVTKIIMKPLEELYAPMVNENEVQ
Specific function: Unknown
COG id: COG3679
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0342 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010368 [H]
Pfam domain/function: PF06133 DUF964 [H]
EC number: NA
Molecular weight: Translated: 14548; Mature: 14417
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.8 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 9.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTNLYDQAYQLEKALRDSEEFTTLSSLYDRVNADAEANQLFADFRNIQMTLQQKQMQG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC EEISEQEMMDAQTKMMNVQQNELIMELMQEEQRMHQLVTEVTKIIMKPLEELYAPMVNEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EVQ CCC >Mature Secondary Structure SQTNLYDQAYQLEKALRDSEEFTTLSSLYDRVNADAEANQLFADFRNIQMTLQQKQMQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC EEISEQEMMDAQTKMMNVQQNELIMELMQEEQRMHQLVTEVTKIIMKPLEELYAPMVNEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EVQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA