| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is recX [H]
Identifier: 229918117
GI number: 229918117
Start: 2347511
End: 2348323
Strand: Direct
Name: recX [H]
Synonym: EAT1b_2397
Alternate gene names: 229918117
Gene position: 2347511-2348323 (Clockwise)
Preceding gene: 229918111
Following gene: 229918118
Centisome position: 78.25
GC content: 47.36
Gene sequence:
>813_bases GTGAAAATTGCAAAGTTCACGACCCAGAAGAAGAACCAAGACCGACTGAACGTCTTCATCGAACGGGAAGGGAAAGAGGA GTTCGCGTTCGCTATCGATGTCGATGTGTTCATCAAGTACGGGCTCACAAAAGGGATGGAGCTCGAAGACGATTTTGTGC AAGACGTCCTTGAGGCGGAAGAAACTCAGAAAGCCTATAAGTTAGCCATCAATTATTTATCGTATCGAATGCGTGCCATC TCAGAGGTACGGGACTATCTCGTGAAGAAAGAGTTAAGTGAATCCGCTATCAAACATGCCATCACACGACTGATCGAGCA GCGCTATTTGAACGATGAGGAGTTCGCGAAAGCGTATGTCCAGACGAAATTCAACACAAGTCCAAGTGGGCCGATCAAAA TCAAACGCGAGCTCGAACAGCTCCGAATCCCACCGGACGTTGTCGAGTCAGTGCTTTCGACAATCTCACACGAAGATCTC GTCGAGAAGGCTGGAAAGTTCGTGAAAAGGAAACAACTGGAAACGAATCGTCGTTCTGCCACAGAAGTGCAACAAAGAAT TCAACAAACCCTGATGCAAAGGGGGTTTACCTTTGATATTATTTCAGAGGCGATTCAAACTTTTTGGGAAGAGGAGGACG AAGATGTCGAGGTTGCGGCATGTCTGAAACAGGCTGAGAAGTTGAGTCGGAAGTTCAGCGGGTACGATGCGTTCGAGCGC AAACAGCGTATGAAGATGCAGCTTCGACGCAAAGGATTTCCGTATGATGTGATTGAACGTACGTTACATCGACTCGCTGA AGAAGAATCGTGA
Upstream 100 bases:
>100_bases TCAGTATATCCAGATGAATACCCTTTCTTCTAACTTATCAAAAATCCTCTACGTTTCTTGAACGTGATATGTTAGAAACA TGGAATGGAGGGGAGTCGTT
Downstream 100 bases:
>100_bases TGGGACATCTGTTTACGGTAGGGGAAAACACGAAAAGGTGGGTCTACATTGACGATTTTAGAATGGATTACAGCACTGAC ACCGATTGTGGCCGTGCTCA
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKIAKFTTQKKNQDRLNVFIEREGKEEFAFAIDVDVFIKYGLTKGMELEDDFVQDVLEAEETQKAYKLAINYLSYRMRAI SEVRDYLVKKELSESAIKHAITRLIEQRYLNDEEFAKAYVQTKFNTSPSGPIKIKRELEQLRIPPDVVESVLSTISHEDL VEKAGKFVKRKQLETNRRSATEVQQRIQQTLMQRGFTFDIISEAIQTFWEEEDEDVEVAACLKQAEKLSRKFSGYDAFER KQRMKMQLRRKGFPYDVIERTLHRLAEEES
Sequences:
>Translated_270_residues MKIAKFTTQKKNQDRLNVFIEREGKEEFAFAIDVDVFIKYGLTKGMELEDDFVQDVLEAEETQKAYKLAINYLSYRMRAI SEVRDYLVKKELSESAIKHAITRLIEQRYLNDEEFAKAYVQTKFNTSPSGPIKIKRELEQLRIPPDVVESVLSTISHEDL VEKAGKFVKRKQLETNRRSATEVQQRIQQTLMQRGFTFDIISEAIQTFWEEEDEDVEVAACLKQAEKLSRKFSGYDAFER KQRMKMQLRRKGFPYDVIERTLHRLAEEES >Mature_270_residues MKIAKFTTQKKNQDRLNVFIEREGKEEFAFAIDVDVFIKYGLTKGMELEDDFVQDVLEAEETQKAYKLAINYLSYRMRAI SEVRDYLVKKELSESAIKHAITRLIEQRYLNDEEFAKAYVQTKFNTSPSGPIKIKRELEQLRIPPDVVESVLSTISHEDL VEKAGKFVKRKQLETNRRSATEVQQRIQQTLMQRGFTFDIISEAIQTFWEEEDEDVEVAACLKQAEKLSRKFSGYDAFER KQRMKMQLRRKGFPYDVIERTLHRLAEEES
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 31800; Mature: 31800
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAKFTTQKKNQDRLNVFIEREGKEEFAFAIDVDVFIKYGLTKGMELEDDFVQDVLEAE CCCCHHHHCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ETQKAYKLAINYLSYRMRAISEVRDYLVKKELSESAIKHAITRLIEQRYLNDEEFAKAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QTKFNTSPSGPIKIKRELEQLRIPPDVVESVLSTISHEDLVEKAGKFVKRKQLETNRRSA HHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVQQRIQQTLMQRGFTFDIISEAIQTFWEEEDEDVEVAACLKQAEKLSRKFSGYDAFER HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH KQRMKMQLRRKGFPYDVIERTLHRLAEEES HHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIAKFTTQKKNQDRLNVFIEREGKEEFAFAIDVDVFIKYGLTKGMELEDDFVQDVLEAE CCCCHHHHCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ETQKAYKLAINYLSYRMRAISEVRDYLVKKELSESAIKHAITRLIEQRYLNDEEFAKAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QTKFNTSPSGPIKIKRELEQLRIPPDVVESVLSTISHEDLVEKAGKFVKRKQLETNRRSA HHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVQQRIQQTLMQRGFTFDIISEAIQTFWEEEDEDVEVAACLKQAEKLSRKFSGYDAFER HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH KQRMKMQLRRKGFPYDVIERTLHRLAEEES HHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]