Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yoaV [H]

Identifier: 229918102

GI number: 229918102

Start: 2335504

End: 2336448

Strand: Direct

Name: yoaV [H]

Synonym: EAT1b_2382

Alternate gene names: 229918102

Gene position: 2335504-2336448 (Clockwise)

Preceding gene: 229918097

Following gene: 229918103

Centisome position: 77.85

GC content: 45.93

Gene sequence:

>945_bases
ATGCAAAATATATTTGAACGCCCTTGGACGGTGGCGTTATTGGCGATTTTCAATACGTTGTTATGGGGGAGTGCGTTCCC
GTTCATCAAGTTGAGTTATGAGAAGCTTGATATCCAATCGAACGAGTATGGGCAACAACTATTGTTCGCGGGCGAGCGCT
TTTTACTCGCGGGGATTCTATTGCTCATCATCAGTCAGACCGTTTTGAAACGATCTGTCCGATTGACCCGTGAAAAGGTT
AAGGCTTATGCGCATCTCGGTTCGTTCTTGACGTTTCTACAATACTTGTTCTTCTATATCGGACTGTCCATTTCGACCGG
TGTCCAAGGGTCGATCATTGCTGGTTCCACATCATTTTTCCAAATGGCCCTCGCTCATTTCCGATATGAAGACGACAAGT
TGAATCGATTGAAGGGGTTTGCTTTAACGTTTGGTTTTTCTGGAATCGTCATCGCAAACTGGCCGGCGACCGGATCTGAA
GTTGGTTTTGGGTTCGGAGAGATTTTACTCATCTTGGCGATGGTATCCGGAGCGTTCGGGAACTTGATAGCGAAGGATTA
CTCGAAGACATATGATGTTGCCCCGATGACGGCTTGGGCGATGGTGATTGGTTCTGTTGGGTTGCTGCTGATCGGCTATC
TATTAGACCCGAATGGTGTTTCCATGCCGTACACCGGACAGACGATTGCGTTCCTGTTTTACTTGGCGATGTTGTCAGCG
ATCGGATTTACATTGTGGAACACGTTAATGAAATACAATCCGGTCAGTCGAATTTCACTCTATATCTTCTTAGTTCCCTT
ATTTGGAGTCATGTTGTCAGGGATTTTACTCGGTGAAACGATTCCGTGGAATGCGGTGGTCGGACTCGGATTCGTTATTG
TCGGCATTTATTTATCTACGCATTTTCAAGGTCGCCGTACGAAAAAACAAACGGATGTCATTTGA

Upstream 100 bases:

>100_bases
GTTTCATCTGAATCCTTTATTTATAATTATTATTATCTAGGTTTATCTTAACACGCTTATCAGTGACTCACAAATAAAAA
GATTAAGGAGTTTTTGTGTC

Downstream 100 bases:

>100_bases
AAAAGAGACAGAGTTGACGGAATTGAAATCCCATGACAAAATATATTAAAAATTCTGAATTTTAAAGTTCGAAAATCGGT
CTTCGTTTGTAAAGACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV
KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE
VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA
IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI

Sequences:

>Translated_314_residues
MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV
KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE
VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA
IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI
>Mature_314_residues
MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV
KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE
VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA
IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34815; Mature: 34815

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGIL
CCCHHHCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLIISQTVLKRSVRLTREKVKAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHH
QMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSEVGFGFGEILLILAMVSGAFG
HHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLST
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HFQGRRTKKQTDVI
CCCCCCCCHHCCCC
>Mature Secondary Structure
MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGIL
CCCHHHCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLIISQTVLKRSVRLTREKVKAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHH
QMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSEVGFGFGEILLILAMVSGAFG
HHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLST
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HFQGRRTKKQTDVI
CCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]