| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yoaV [H]
Identifier: 229918102
GI number: 229918102
Start: 2335504
End: 2336448
Strand: Direct
Name: yoaV [H]
Synonym: EAT1b_2382
Alternate gene names: 229918102
Gene position: 2335504-2336448 (Clockwise)
Preceding gene: 229918097
Following gene: 229918103
Centisome position: 77.85
GC content: 45.93
Gene sequence:
>945_bases ATGCAAAATATATTTGAACGCCCTTGGACGGTGGCGTTATTGGCGATTTTCAATACGTTGTTATGGGGGAGTGCGTTCCC GTTCATCAAGTTGAGTTATGAGAAGCTTGATATCCAATCGAACGAGTATGGGCAACAACTATTGTTCGCGGGCGAGCGCT TTTTACTCGCGGGGATTCTATTGCTCATCATCAGTCAGACCGTTTTGAAACGATCTGTCCGATTGACCCGTGAAAAGGTT AAGGCTTATGCGCATCTCGGTTCGTTCTTGACGTTTCTACAATACTTGTTCTTCTATATCGGACTGTCCATTTCGACCGG TGTCCAAGGGTCGATCATTGCTGGTTCCACATCATTTTTCCAAATGGCCCTCGCTCATTTCCGATATGAAGACGACAAGT TGAATCGATTGAAGGGGTTTGCTTTAACGTTTGGTTTTTCTGGAATCGTCATCGCAAACTGGCCGGCGACCGGATCTGAA GTTGGTTTTGGGTTCGGAGAGATTTTACTCATCTTGGCGATGGTATCCGGAGCGTTCGGGAACTTGATAGCGAAGGATTA CTCGAAGACATATGATGTTGCCCCGATGACGGCTTGGGCGATGGTGATTGGTTCTGTTGGGTTGCTGCTGATCGGCTATC TATTAGACCCGAATGGTGTTTCCATGCCGTACACCGGACAGACGATTGCGTTCCTGTTTTACTTGGCGATGTTGTCAGCG ATCGGATTTACATTGTGGAACACGTTAATGAAATACAATCCGGTCAGTCGAATTTCACTCTATATCTTCTTAGTTCCCTT ATTTGGAGTCATGTTGTCAGGGATTTTACTCGGTGAAACGATTCCGTGGAATGCGGTGGTCGGACTCGGATTCGTTATTG TCGGCATTTATTTATCTACGCATTTTCAAGGTCGCCGTACGAAAAAACAAACGGATGTCATTTGA
Upstream 100 bases:
>100_bases GTTTCATCTGAATCCTTTATTTATAATTATTATTATCTAGGTTTATCTTAACACGCTTATCAGTGACTCACAAATAAAAA GATTAAGGAGTTTTTGTGTC
Downstream 100 bases:
>100_bases AAAAGAGACAGAGTTGACGGAATTGAAATCCCATGACAAAATATATTAAAAATTCTGAATTTTAAAGTTCGAAAATCGGT CTTCGTTTGTAAAGACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI
Sequences:
>Translated_314_residues MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI >Mature_314_residues MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGILLLIISQTVLKRSVRLTREKV KAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFFQMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSE VGFGFGEILLILAMVSGAFGNLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLSTHFQGRRTKKQTDVI
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34815; Mature: 34815
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGIL CCCHHHCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH LLIISQTVLKRSVRLTREKVKAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHH QMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSEVGFGFGEILLILAMVSGAFG HHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH NLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLST HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HFQGRRTKKQTDVI CCCCCCCCHHCCCC >Mature Secondary Structure MQNIFERPWTVALLAIFNTLLWGSAFPFIKLSYEKLDIQSNEYGQQLLFAGERFLLAGIL CCCHHHCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH LLIISQTVLKRSVRLTREKVKAYAHLGSFLTFLQYLFFYIGLSISTGVQGSIIAGSTSFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHH QMALAHFRYEDDKLNRLKGFALTFGFSGIVIANWPATGSEVGFGFGEILLILAMVSGAFG HHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH NLIAKDYSKTYDVAPMTAWAMVIGSVGLLLIGYLLDPNGVSMPYTGQTIAFLFYLAMLSA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IGFTLWNTLMKYNPVSRISLYIFLVPLFGVMLSGILLGETIPWNAVVGLGFVIVGIYLST HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HFQGRRTKKQTDVI CCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]