Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is yvdA [H]

Identifier: 229918097

GI number: 229918097

Start: 2330240

End: 2330791

Strand: Direct

Name: yvdA [H]

Synonym: EAT1b_2377

Alternate gene names: 229918097

Gene position: 2330240-2330791 (Clockwise)

Preceding gene: 229918096

Following gene: 229918102

Centisome position: 77.68

GC content: 46.38

Gene sequence:

>552_bases
GTGTCAGTCGTAAAAGAAATGCTTGAATTCAATAAACGTTTCGTAGAGGAAAAACAGTACGAACCGTTCGTATCTGATAA
ATTTCCAGATAAGAAAATCGTGATTTTGACGTGTATGGATACACGTTTGACGGAACTTTTACCTCAAGCGCTAGGACTTA
AGAACGGAGACGCTAAAATCATTAAAAATGCGGGTGCAGTCTTGTCACACCCATTCGGTTCGGCCATGCGCTCCATTTTA
GTCGCTCTTTATGCGCTAGGAGCAGAAGAAGTCGTCGTCGTCGGACATTACGATTGTGGAATGGCGGCGATTGAACCGAC
TGTCGTCATCGAAGAGATGGAGCGTCGTGGAATCGACCCTCAAACCTTGAAGACGCTAAAGTCGTCAGGGATGGATTTGG
AGCAGTGGCTCCATGGTTTTGATTCGGTTGAAGAGAACGTCGTTCATTCTGTCAACCTGATTAACAATCATCCACTGTTG
CCACCAGGAACAAATGTACACGGATTCGTGATCGACCCGGCGACGGGACGTCTTGATCCGATCGAAGCATAA

Upstream 100 bases:

>100_bases
AATGGCGATGACAGCGAAAGTGAACACGCTGTTCGGAGCATGGATGGTCATCGGACTCATCGTTTCAAGATTTGTGTTGT
AAAAAAGAGGAGGCGTTAAC

Downstream 100 bases:

>100_bases
GAAAGGAGCGCGTTCAGCTTGAACGTGCTCCTTTTGGGTTATCCGTACGTATTCGTCGGGATGTCGTCATAGTTATCTTC
TTCTTGCTTTTGTTTCGCTT

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSIL
VALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLL
PPGTNVHGFVIDPATGRLDPIEA

Sequences:

>Translated_183_residues
MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSIL
VALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLL
PPGTNVHGFVIDPATGRLDPIEA
>Mature_182_residues
SVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSILV
ALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLP
PGTNVHGFVIDPATGRLDPIEA

Specific function: Reversible hydration of carbon dioxide [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 20195; Mature: 20063

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHH
IKNAGAVLSHPFGSAMRSILVALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDP
HHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHHHHHHCCCCH
QTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLPPGTNVHGFVIDPATGRLDP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
IEA
CCC
>Mature Secondary Structure 
SVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHH
IKNAGAVLSHPFGSAMRSILVALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDP
HHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHHHHHHCCCCH
QTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLPPGTNVHGFVIDPATGRLDP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
IEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]